| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0527 |
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| Symbol | |
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| ID | 4251650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 606618 |
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| End bp | 607982 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638117086 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_732664 |
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| Protein GI | 113968871 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGAAA TCGCGAAGCC TACTCCCGTA GAAAATCTTT GGAAAAGGTG GTTGCTGGTA
CTCGATCCTG AGCAATCTCT ACCTGAGTGT AGTGAAGAAC TTAAACAAGC TGCTTGGAAC
TGTTTAAAAG CAGTGTCGGC AGCTGAAGCT CTAGTATTGC TGCAAAAATA TGATTTACGT
GTCGCTATTG CCTTTATCAA TGATACTAAT CAAGTCTTAC TCGCTAACGA AATTGCGATT
ATTCAAACCG AATATCCCTC GCTTCATTGG ATTGCTGTCA CCGATAGCAC CTTGGAGCAG
CACTGCAGTT GGTTAAGTGC CGCTAACTTT ATTGATTATT ATCACCGTCC ATTCGATTGG
GGGCGTTTTG CCGATACCCT TGGGCATGCA TGGGGGATGG CGCAGTTGAC TGTCGCTAAA
AAGGGCAAGT CAGCGCCAAC AGAAGCTTTG ACCACCATTA AAGGGGATCA TCCGTTGTTG
CAACAGCTGC GTCAGCGGTT ACACAAATTT AGTTTGTCGG ATGACACGGT TTTACTCAGT
GGTGAAACGG GCTCAGGCAA AGGTCTCTGT GCAAAAACGC TCCATAGTTT ATCTAAACGT
CGAGATGGCC CATTTATCAC AGTTAATTGC GGTGCACTTC CTATTGGACT GATCCACTCT
GCACTCTTTG GTCACGAAAA AGGGGCCTTT ACCGATGCAG ATAAACGTTA TATCGGCCAT
TTAGAGCAGG CCAATGGCGG CACGCTCTTT TTAGATGAAA TTGCCGACTT ACCTTTAGAC
TTACAGGTCA ATCTACTGCA TGTTCTCGAT GATAAACAGA TCATGCGGAT CGGCGGTAAT
GTGCCCATTA AGGTGGACTG TCGTTTGTTG TTTGCTTCTC ACCAAGACCT CGAAGTCGCG
ATTGATGAAG GCCGTTTCCG TGAAGACTTA TATCACCGCA TTAATGTGTT GCGGCTGCAT
GTCCCCAGCC TGAGGCAATA TAGTGATGAA GTGATGTTAC TCGCTGAAGA CTTTTTACAA
GAGAATACAG ACAGTAATGT CCAGTTTCAT TTTAGCGACG ATGCTCGCTG TGCCATGAAG
CACTACAATT GGCCCGGTAA TGTACGTGAA CTCCGCAACC GTATTCGCCG AGCTATGGTG
TTGAGTGATG ACAGCAAGAT CACAGCGCAG TTGCTAGGGT TGGATCAATT GCCAAGCCGA
GCTGGTCAAG ATTTGGCTCG CTGTCGTGTT GAGCATGAGG CGGAAGTACT ACTAAAAGCG
ATCAGCGATC ATAAGCACAA TATCTCCGCC GCCGCCCGCT CATTAAATAT CTCCAGAGCA
ACGTTTTACC GCTTATTGAA AAAGTGTCAG ATCAAGATGC CCTAG
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| Protein sequence | MDEIAKPTPV ENLWKRWLLV LDPEQSLPEC SEELKQAAWN CLKAVSAAEA LVLLQKYDLR
VAIAFINDTN QVLLANEIAI IQTEYPSLHW IAVTDSTLEQ HCSWLSAANF IDYYHRPFDW
GRFADTLGHA WGMAQLTVAK KGKSAPTEAL TTIKGDHPLL QQLRQRLHKF SLSDDTVLLS
GETGSGKGLC AKTLHSLSKR RDGPFITVNC GALPIGLIHS ALFGHEKGAF TDADKRYIGH
LEQANGGTLF LDEIADLPLD LQVNLLHVLD DKQIMRIGGN VPIKVDCRLL FASHQDLEVA
IDEGRFREDL YHRINVLRLH VPSLRQYSDE VMLLAEDFLQ ENTDSNVQFH FSDDARCAMK
HYNWPGNVRE LRNRIRRAMV LSDDSKITAQ LLGLDQLPSR AGQDLARCRV EHEAEVLLKA
ISDHKHNISA AARSLNISRA TFYRLLKKCQ IKMP
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