| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0523 |
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| Symbol | |
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| ID | 4251646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 602377 |
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| End bp | 603432 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638117082 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_732660 |
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| Protein GI | 113968867 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAAA GTAAGCTCAT CATCGCCGTT CCACTGATAC TCGCCGCTGT CGCGGGTGGC
GGCTATTACT GGTGGACGCA AGTACGTTTT ATCGAAACCA CTGACAACGC CTATGTTGAG
GCCGATATCT CCCATGTGAG CGTGAAAGTC CCAGGTTATG TGGTGATATC CGATGTGACC
GATAACCAGC ATGTGCGCAA GGGCGAGTTA TTGGCGCAAC TTGAAGATAA CCAGTTTAGC
GCCAAAGTCA GCCAAGCCGA GGCGTCACTC GGCAGTGCTA AGGCCGATCT GCAAACCTTA
GCCGCTAAGG TGGAATTACA ACATGCGTTG ATCAGTCAAG CGAGTGCGGG CGTGGTCGCG
GCGCAGGCCG ACAAACTGCG CGCCGAGCAA CAGTTAACTC GTGCTAAAAA GTTAAAAGTC
AGCAACTACA GCTCACAGGA CGATGTCGAC CAATTGCAAG CGGGTTTTGA TTCTGCCGCC
GCTGGGCTGG ATGAAGCCAA GGCACTGTTA GTGGCTAAAG AGCGTGAGCT TGCCGTGTTC
AATGCCCAGC TTAATCAAGC TGGCTCTGTG GTTGAACAGT CGAATGCGGC ATTGGAGCTG
GCTAAAATTC AGCTTAATGA TACCCGCGTA ACCGCGCCTT TCTCTGGGGT GATTGGTAAA
CGCGGCGCCA TGGTGGGGCA ATATGTGCAG CCCGGCCAGG CACTCTACAG TTTGGTTCCG
GATGGGGCTG TGTGGATCAC GGCGAACTTT AAAGAAACCC AAATCCAACA TATGCAACCT
GGGCAGTCGG TGCAGGTCAG TCTCGATGCG TTTCCCGACA AAACCTTTAC AGGTGTTATC
GATAGTCTGT CGCCGGCGTC CGGAGCCAAA TTTAGTCTGC TGCCCGCCGA AAATGCCACG
GGTAACTTCA CTAAAATCGT GCAACGTATT CCGGTGCGGA TCCGTTTAGA TCTCTCAGAA
GAAGAGGCAC GTGTCGTCCC CGGTTTAAGT GCCGTGGTGA AGGTCGATAC TGCGTCGCAT
CCGACGACAG CTATCGCTGC TAACGTCGGT CGCTAA
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| Protein sequence | MSKSKLIIAV PLILAAVAGG GYYWWTQVRF IETTDNAYVE ADISHVSVKV PGYVVISDVT
DNQHVRKGEL LAQLEDNQFS AKVSQAEASL GSAKADLQTL AAKVELQHAL ISQASAGVVA
AQADKLRAEQ QLTRAKKLKV SNYSSQDDVD QLQAGFDSAA AGLDEAKALL VAKERELAVF
NAQLNQAGSV VEQSNAALEL AKIQLNDTRV TAPFSGVIGK RGAMVGQYVQ PGQALYSLVP
DGAVWITANF KETQIQHMQP GQSVQVSLDA FPDKTFTGVI DSLSPASGAK FSLLPAENAT
GNFTKIVQRI PVRIRLDLSE EEARVVPGLS AVVKVDTASH PTTAIAANVG R
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