| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0522 |
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| Symbol | |
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| ID | 4251645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 601326 |
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| End bp | 602279 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638117081 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_732659 |
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| Protein GI | 113968866 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTCA ATCGTGTGCA GATATTTGCC CAAGTGGTCG AGCAAGGCAG CTTTACTGGC
GCCGCCAAGG CCCTAGGCTT AACTAAGGCC ACCGTCAGTC GCAAGATTGC CGAACTGGAG
TCCGATACTG GCACCCAATT GTTATTCCGC ACGACCCGCG CCCTCAAACT CACCGAGGCG
GGATCGAGTT ACTACAATCG GATCAATAAG ATCTTGAGCG ATCTGCAGAG CGCCGAAAAT
CAGCTCAGCG CCCACCAGCA ATTGATTAAA GGCAACCTAA AAATAGTGTG CCCCATCGAG
TTAGGCCAAT TGTTCCTCGG GCCTATATTC GCCCAGTTTT TAACCCTTTA TCCCGATATC
ACCATTGAGG CTGAGCTCAC GAACCGCAAA GTGGATGTAA TAGAAGAAGG CATCGATTTG
TTATTCCAAA TCGCCGACTC GAGCGATACT CGTCTGCAGA GTTATTCCTT AGTTAATGCT
TACAAATCAT TGATGGCAAG CCCAAGTTAT TTAGCCGAGC ACGGTACCCC AAAAGTGCCG
CAGGACTTGG CCAAGCATAA AGCGATTCGC TTACAGTCGG CACATATTGA AGGGGCGTGG
AAGCTGTTTG ATGGCCAGTC TTGGGTGGTG ATAGAACCCG TCACGCAGCT AACCGTAAAC
AATGTCACCA TTGCCCGCGA AGCCGCCATT GCGGGGCTTG GCATTACGGC CGTGCCGTCG
ATTATTGCGC AGGAAGCGAT AGAGAAAGGC TATTTAGTGC CGCTCCTTGA CGATTATCCT
ATGGTGCAAA CCAAAGTGGT GCTCAGTTAC CCCAAACGGG CGTATTTACC CCGCAAATAT
CGTGTCTTCA TCGAATTTAT CTATACCGCC CTGTTCAAAC GCTGGGGTTC ACAGGTATTA
GAAGTGCCGG AATTTATTGG CCAGCAAGAA CCAAACAACC CTCGTTCGAC TTAA
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| Protein sequence | MDLNRVQIFA QVVEQGSFTG AAKALGLTKA TVSRKIAELE SDTGTQLLFR TTRALKLTEA
GSSYYNRINK ILSDLQSAEN QLSAHQQLIK GNLKIVCPIE LGQLFLGPIF AQFLTLYPDI
TIEAELTNRK VDVIEEGIDL LFQIADSSDT RLQSYSLVNA YKSLMASPSY LAEHGTPKVP
QDLAKHKAIR LQSAHIEGAW KLFDGQSWVV IEPVTQLTVN NVTIAREAAI AGLGITAVPS
IIAQEAIEKG YLVPLLDDYP MVQTKVVLSY PKRAYLPRKY RVFIEFIYTA LFKRWGSQVL
EVPEFIGQQE PNNPRST
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