| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0517 |
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| Symbol | |
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| ID | 4251640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 595325 |
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| End bp | 596617 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 638117076 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_732654 |
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| Protein GI | 113968861 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCAA TCACTCAGAA ATCTATTTTC CATTCTTTTT CTACTGTGTC TGCTACGGGC
TTAAGGTCGT TGTTTACTCC TTCCCGCTTA GCGCTGGCGC TGATGCTTAC CTCGTTAACT
ATTACGGCCC CCACCTTCGC GGGTGAAGGC CATGACCACG GCGCTGAAAA GGTGGCCAAT
ACCGCTGAAA AGAGCGTAAG TGCAACAGAA GATGACCATG GTGAGCAGGC ACTCACTCTG
ACGCCTGCGC AGTTGGAACT TGCAGGGATC CGCCTCTTAC CCCTGAGCAG TGACAGCTTA
AGCCTAAGCA ATCTCAATCT CGATACTATG GCGACCGCCA CTCTAGTGGT CGACCGTGAT
AGAACCGCCA CTTTGGCACC ACAGCTGGAT GTGCGTGTGC AGGCGCGCCA TGTTGTGCCC
GGTCAAGAGG TGAAAAAAGG TGAGCCCTTA CTGACCTTAG GTGGGGCAGA AGTCGCCAAG
GCGCAGGCCG AATATATCAA TGCCGCCGCT GAGTGGAACC GTGTGCGCCG CATGAGTGAA
AGCGCCGTGA GCGTGAGCCG CAGAATGCAG GCGCAGGTCG ATGCCGAACT CAAGCGAGCG
ATTCTGGAGG CGATCAAAAT GACGGCGGAA CAAATACGCA CCTTAGAGTC GACCCCAGAA
GCTATCGGCA GCTATCAGTT ACTGGCGCCT ATCGATGGCC GTGTGCAGCA GGATATCGCC
ATGCTAGGTC AAGTGTTCAC CGCTGGCACA CCATTAATGC AGTTGACCGA TGAGTCGCAT
CTTTGGGTTG AAGCGCAATT AACCCCAGCA CAGGCGGCCA ATGTGAATGC CGGCGGCCCG
GCGTTAGTGC AGGTCGGGGA TAAAACCTTG GCGGGCAAGA TTATCGGCCG TTCCCATGAG
CTGGATAGCG TGACGCGCAC CGAGCAGATT TTAGTCAGCA TGCCAAACCC TGAGCATGTG
TTGCACGCGG GACAATTTGC CGAGCTTTAC TTTGCCGATG CGCCTGCAAG TGCAGACGGA
GCCGCTTCCT CATCGGGCTT CTCATCTGGA ATCGTCCTGC CCGATGCGGC GCTAACACGT
GGCGGTGATG GTGATTGGCA GATTTTTGTT CAAGACGAAG ATGGTTTTGA AGCCATAGAG
GTGGAGCTGG TTCAGCGTCA ACGTGGCTTA AGCCTAGTAC GCGGGGATGA GTTGGATAAG
GCGCGGCAGG CACAACAGAA AGTGGTGATT GAGGGGGCGT TTTTCTTGGC ATCGGAGCAG
GCCAAAGCTG GCTTTGATAT TCATGCCCAC TAA
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| Protein sequence | MNSITQKSIF HSFSTVSATG LRSLFTPSRL ALALMLTSLT ITAPTFAGEG HDHGAEKVAN
TAEKSVSATE DDHGEQALTL TPAQLELAGI RLLPLSSDSL SLSNLNLDTM ATATLVVDRD
RTATLAPQLD VRVQARHVVP GQEVKKGEPL LTLGGAEVAK AQAEYINAAA EWNRVRRMSE
SAVSVSRRMQ AQVDAELKRA ILEAIKMTAE QIRTLESTPE AIGSYQLLAP IDGRVQQDIA
MLGQVFTAGT PLMQLTDESH LWVEAQLTPA QAANVNAGGP ALVQVGDKTL AGKIIGRSHE
LDSVTRTEQI LVSMPNPEHV LHAGQFAELY FADAPASADG AASSSGFSSG IVLPDAALTR
GGDGDWQIFV QDEDGFEAIE VELVQRQRGL SLVRGDELDK ARQAQQKVVI EGAFFLASEQ
AKAGFDIHAH
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