| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0506 |
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| Symbol | |
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| ID | 4251752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 586447 |
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| End bp | 587928 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638117065 |
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| Product | 3-octaprenyl-4hydroxybenzoate decarboxylase |
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| Protein accession | YP_732643 |
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| Protein GI | 113968850 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTTA AGGATTTACG CAGCTTTATT GATCATCTGG AAGCCAATGG CGAACTCAAA
CGCATTAGCT ACCCCGTTGA TCCTCATTTA GAAATGACAG AGATCGCTGA TCGCGTTCTA
CGCGCCAAAG GCCCTGCACT CCTATTCGAA AATCCAACGA ATCATTCAAT GCCAGTGCTG
GCCAACCTCT TTGGTACCCC AAAACGCGTC GCCATGGCGC TGGGCAAAGA AGACCCGCTC
GCGCTGCGCG ATGTAGGTGA GCTGCTGGCG TTTTTAAAAG AACCCGAGCC ACCACGCGGC
TTTAAAGACG CGATTTCAAA AATCCCCATG TTCAAGCAAG CCTTGAATAT GCCGCCTAAG
ACGGTGCGTA ATCCCGCCTG CCAGCAAGTG GTAAAAACGG GCGATGAAGT CGATTTAACT
CAGCTGCCGA TTCAGCATTG CTGGCCGGGC GATGTCGCGC CTTTGGTCAC TTGGGGCTTA
ACCATTACCA AAGGTCCGCG TAAGAGTCGC CAAAACCTTG GGATCTACCG TCAACAGTTG
CTCGGCAAGA ATAAACTCAT TATGCGCTGG CTGTCCCACC GTGGTGGCGC CCTCGACTTT
GCCGATTTTA AAGAGCAATT CCCCGGCGAG CGTTACCCTG TGGTGGTAGC CTTAGGCTCT
GATCCTGTGA CCATTTTAGG CGCGGTCACC CCAGTGCCCG ATGCCATGAG CGAATACGCC
TTCGCAGGAT TGCTGCGCGG CGAGCGTACC GAAGTCTGCA AGGCATTAAG CTGTGATTTA
GAAGTGCCCG CCAGCAGCGA GATCATCCTC GAAGGCTATA TCGATCCCGA CGAAATGGCC
GAAGAAGGCC CCTACGGCGA CCACACGGGT TACTACAACG AGACGGATAA ATTCCCAGTC
TTTACCGTGA CCCATATTAC CCACCGTAAG GATCCGATTT ACCACAGCAC CTACACAGGC
CGTCCACCGG ATGAACCCGC CATGTTAGGT GTGGCACTCA ACGAAGTGTT TGTGCCGATT
TTGCGTAAGC AATATCCTGA AATTATTGAT TTTTACCTGC CGCCCGAAGG TTGCTCCTAT
CGGATGGCGG TGATCTCGAT TCGTAAACAA TACCCTGGCC ATGCGAAACG GGTGATGATG
GGCGCTTGGT CCTTCCTGCG CCAATTTATG TATACCAAAT TTATTGTGGT GGTCGACGAC
GATGTGAATT GCCGCGACTG GAACGATGTG ATTTGGGCCA TTACCACCCG TATGGATCCT
AAGCGCGATA CCGTGATGAT CGATAACACG CCTATCGATT ACCTCGACTT TGCCTCCCCC
GTGGCAGGCC TCGGCTCCAA AATGGGCCTC GATGCCACCA ATAAGCGGGA AGGCGAAACC
AACCGCGAAT GGGGCACACC GATCGTGATG GATCCTAAGG TTAAGCAAAA GATCGACTCA
ATCTGGGATG AGTTAGGCAT AGACGACAGC CCAACCCTAT AA
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| Protein sequence | MSFKDLRSFI DHLEANGELK RISYPVDPHL EMTEIADRVL RAKGPALLFE NPTNHSMPVL
ANLFGTPKRV AMALGKEDPL ALRDVGELLA FLKEPEPPRG FKDAISKIPM FKQALNMPPK
TVRNPACQQV VKTGDEVDLT QLPIQHCWPG DVAPLVTWGL TITKGPRKSR QNLGIYRQQL
LGKNKLIMRW LSHRGGALDF ADFKEQFPGE RYPVVVALGS DPVTILGAVT PVPDAMSEYA
FAGLLRGERT EVCKALSCDL EVPASSEIIL EGYIDPDEMA EEGPYGDHTG YYNETDKFPV
FTVTHITHRK DPIYHSTYTG RPPDEPAMLG VALNEVFVPI LRKQYPEIID FYLPPEGCSY
RMAVISIRKQ YPGHAKRVMM GAWSFLRQFM YTKFIVVVDD DVNCRDWNDV IWAITTRMDP
KRDTVMIDNT PIDYLDFASP VAGLGSKMGL DATNKREGET NREWGTPIVM DPKVKQKIDS
IWDELGIDDS PTL
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