Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0504 |
Symbol | |
ID | 4251750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 584225 |
End bp | 585238 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638117063 |
Product | transposase IS116/IS110/IS902 family protein |
Protein accession | YP_732641 |
Protein GI | 113968848 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTTA CACTAATAGG AATTGATCTC GCAAAAAATA TCTTCCAAGT ATGTGGGGTA AATCAAGCTG GCAAGAGTGT TTTTAACCGT TCGATTAAAC GTGCTCAGCT CCTTACTTTT CTGCGTACTT ACCCTGATGC CACTATTGCG ATGGAAGCCT GCAGTGGCTC TAACTATTGG GGCAGAGAGT TACTTTCTCT CGGGCATGAC GTCAAACTGA TCCCGCCTCA GCATGTTAAG CCATTTGTCA AAGGCAATAA GAACGATCGC AATGATGCCT TCGCTATCTG TGAGGCGGCG CAGAGACCGA ACCTGATTTT CGTCCAGCCG AGAACCTTAG CGCAGGTTGA TATCATCATT ACTCACAGAA TTCGCGAGCG CCGGATCAGA ATACGCACTG CACTAACCAA TCAAATCAGA GGTTTACTAA GTGAATATGG AATAGCCCTC CCTAAAGGAC GTAATCCATT GAATCTTTTA CTGCCGGAAT TACTTGAGGA TGCCAGTAAT CAACTCACTA CGATTGCACG CCAATACATG CGTGAGCTGA TGGAAGAGTT GCGTGCGATC AACGTTGCAA TAGGTTCACT GGAAAAAGAC ATCAAACTGC AGGCAAGAAC GCACCCAGAT GCCAAGCGAC TAATGGGTAT AAGAGGCGTT GCAGAAATCA TTGCCACTGC CGCGGTGTCA TTTGCCGGAG ATGGCTCTGG CTATCATGGT GCTCGGCATT TTTCTGCAAA TTTAGGACTG GTTCCTAAAG AGTTTTCCAG TGGGGGAAAA CAGAAATTAA GCGGCATAAC CAAACGAGGT AACAGCTATC TGCGGCGGCA ACTGATCCAG GGAGCTTGGT CGATTATTCG CTATGCAAGT AAGAGTAATG ACAGGATCTC CGTATGGGCC TTAAAGGTGA TTGAGCGGCG GGGTAAACAG AAAGCGGCAG TAGCAATTGC AAACAAATTG GCGCGGATCA TTTGGGCGCT GCTGTTTCAT CGCAGCGAAT ATCGGTCTTG TTAA
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Protein sequence | MKVTLIGIDL AKNIFQVCGV NQAGKSVFNR SIKRAQLLTF LRTYPDATIA MEACSGSNYW GRELLSLGHD VKLIPPQHVK PFVKGNKNDR NDAFAICEAA QRPNLIFVQP RTLAQVDIII THRIRERRIR IRTALTNQIR GLLSEYGIAL PKGRNPLNLL LPELLEDASN QLTTIARQYM RELMEELRAI NVAIGSLEKD IKLQARTHPD AKRLMGIRGV AEIIATAAVS FAGDGSGYHG ARHFSANLGL VPKEFSSGGK QKLSGITKRG NSYLRRQLIQ GAWSIIRYAS KSNDRISVWA LKVIERRGKQ KAAVAIANKL ARIIWALLFH RSEYRSC
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