Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0501 |
Symbol | |
ID | 4251747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 575886 |
End bp | 580832 |
Gene Length | 4947 bp |
Protein Length | 1648 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638117060 |
Product | peptidase S8/S53 subtilisin kexin sedolisin |
Protein accession | YP_732638 |
Protein GI | 113968845 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAATC TGCAGTTCAA ACGTAGCGCT ATCGCGAGCC TGACAGCGCT CTATGTTAGC GGTGCTTGTA CGTTTGCATT GGCGGCACCT GGGATGGAGA AGGTCGCGGG GAGCAGTTTT TATACTCCGA CTTTCACCGC TGAAGATGTC TTAAAAGTGA CCAATGAACG TAAGGCCGAG CTGAGTGGTG ACATTTATGT CGGCACGCCA GGACAGCTAA ACCGCGTTAA AAAAGCCCGT ACTCCTGAAG AGATTTTTCA GCCCGAAGCC AGTTCTCAGG GCGTGCAAAC CTATATCGTT CAATTAGATG CTGAACCCCT TGCGACCTAC GAGGGTGATA TTCCTGGTTT TGCTGCCACT AAGGCACCGG TTAACCGTTC TATCATCGCT AAGGGCCGTG TCAGCGTAAA TACAGCTGCG GCTCAGTCCT ATAAGAGTTT CTTGTTAGGC AAGCAGGACA AGTTTGTTTC GCGCGTACGT CAAGCGGGCG TTAACCTTAA AATCAACAAG CAATTCACTA TTGCCAGCAA CGCATTAGTT GTTGAAATGA CGCAGGAAGA TGCGATTCGT ATGTCGCATC AAGCGGGTGT GAAGCGTATT TCGCCTAACC GTATTTTTGA ATTGCGCACC GACCGTGGTC CTGAATTTAT TGGTGCCGAT CAAATGTGGC AAGGCACCGC CACTCAAGGT GGGTTACCTG TTAAAGGTGA AGGCATGGTG GTCGGTATTA TCGATACTGG TATCAACACC GACCATGTCG CCTTTGCAGA TGATGAAGAA TATGCACGCT TAAACCCATA CAAAGGTCAG GCGATCGGCG ATTGTGGCGC CTTCCCTGAA CTGTGTAACA ACAAGTTAGT CGGCCTGCAT TCTTACCCTG AAATCACCGA TGTGTATGCT GCCCCTGAGT TCCAAACTTC TAGCGGTGCG AAAAAACGCA TCCGCCCAGC TAACGCTGAG GATTACGCGG GTCATGGTTC TCATACGGCG AGTACTGTTG CGGGTAACAC CTTAAAAGAT ACACCACTGC AAGGTTTTAC TGGCGATAAG GTCAGCGATG GTGTGGATGT ACCTTTTACC TTCCCTCAGA CCAGTGGTGT CGCGCCGCGT GCCCACATTA TTGCCTACCA AGTGTGCTGG CCGGGCAGCA GTGGCGACCC TTATGCGGGC TGCCCTGAAT CAGCCATTTT ATCGGCATTT GAAGATGCGA TTGCCGATGG TGTCGATGCG ATTAACTTCT CTATCGGTGG CGCCGAAAAC ATGCCTTGGG GTGACCCAAT GGAGCTGGCT TTCCTGTCTG CGCGCGAAGC GGGGATTTCA GTGGCCGCGG CCGCGGGTAA TAGCGGAGCC TTTTGGACTG CAGACCACTC TTCACCTTGG GTAACTACGG TTGGAGCCTC GACTCATGAC CGTAAACTCA AGGCAGGTAT TAAGAGCATT ACTGCCTTTG AAGGTACGGG TAAACCAACA ACGGCGATTC AAGGGACTAG CTTCTCAGGT TCTATTACGG GTGAAGTGGT ATTGGCGGAG AAATATGCCG ATCCCAACCC TAATGACAGC TACAAAGCGG CAAGCTGTAA CGTGCCTTTC CCTGCGGGTA CCTTTACTTC GGATCAGATA GTCGTCTGTG AGCGTGGCGA TATTGCCCGT ATCGAAAAAG CGAAAAACGT GGCAGCGGGT GGCGCGGGTG GTGTGATCCT GCAAAACATG AGCTCTTCAG TGGATAACCT CGAAGCGGAT ATGTACGTGA TCCCGGGGAT CCAGGTGAAG TATACCGATC GCCTTAAAAT CCGTAACTGG GTACTTAAAA ATCCAGGTAC GGCGCGAGCG ACTATTACTG ACTTTACTAA CGACTATAGT TTCGACGCGT CAGCGGGTAA TAACCTAGCG ACATTCAGCT CCTTAGGCCC AAGTAAAACC AACAACACCT TAGTGCCAGA TTTAACGGCG CCGGGTGTGG ATATTTACGC GGCCAACGCG GACGATCAGC CGTTTACCAA TAATCCGAGT GCGTCTGACT GGACCTTTAT GAGCGGTACC TCAATGGCGG CACCGCATGT CACGGGGGCT ATGACCCTGC TGACTCAGTT GCACCCCGAT TGGACGCCCG CTGAAATCCA GTCTGCACTC ATGCTTACCG CAGGCCCTGT GGTATTAAAT ACCGGTTATG AGCTCATCGA GCCTTACTAC AACTTTATGG CGGGTGCGGG TGCGATCAAC GTAGCTCGCG CAGCGGATAC TGGGTTAGTG ATGGATGAAA CCATCGAAAA CTACCGTAAT GCCGATCCGA CCAACGGTGG TGTAGTGAAC TGGTTGAACT TACCTTCCAT GGTTGAAATG GAATGTGAAA AAACCTGTAG CTGGATGCGT ACCGTTAAGG CGACCCGTGA TGGCACTTGG ACAGTCGAAG GTGTAGGTAA AGAAGAAGGT TTTGAAGTTT CTGTATCGCC AGCTTCCTTC AGCCTTAAGG CGGGTGAGTC GCAAAGCATT ATTATCACTG CTAAAACGCC AAATCTTATC GAGCATAAGG TTGAGCCTGA AGATGGTTCA TCGCCATGGA GTGCAGTGCT CAATCAGAAC ACTTTCTTCA ATGGTCAAGT ACTGTTAAAA GAAGTTAATA GCAGCTCTCC TGATGTACAT ATGCCTGTGG TTGTGGCGAG TGTTGCCGAG CAATTACCGA TCTCGCACCG CTTTGAAATC TCTCGCGATC AAGGTACCGA GTCTTTGGTG GTTAACACGG ATTCATACAG CCAACTGACA CCACGTTTCT ATGGCCCTGT GAAGCCAGAA ATTGCCTCCA GCAAGTTAAC GGCTGTGAGC GCTATCTTAA GCAAAGCGAA CATAGATAAG GGTTGGGATA TTCGTCCGCT CGTGGTGCCA GAAGGTACTA AACGTCTCGT GGTTGAAGTT CAAAAGGCCG AACAGGTATC GACGCTCGAA AACCTAAACC CACGTTATAC CCAACTTCAC CCCTTTATCA TGGTGGGTCT GGATAAGAAC GGCAGTAATA CCTTTGTGCC AGAGGGAGAT AGCCCAACGA GTTCTGAGAT CAGAGCGGAA TATATCGATG AGTTGATGTG TATCTCAACT AGCCAGTCCG AGCATAACTA CTGTAGCTTT GAGAGCCCAA CCCCAGGCAC TTACTGGATT GCAACCGCTA TGGCCTATGC ATCTGGTCAA GGTGATGTTG CCATCGAAAC GGGATATGCC CTAGTGATGG AAAACGATGA CAAGGGCTAC CTGAGCATGT CAGGCCCTGC ATCTCACGAC GGTAATGGTA ACTATGAGAT TGGCCTTAAC TGGAACATTC CTGAAACCAA AGCTGGCGAT GTTTACTACG GTGGATTCGA CCTTGGCAAT ATGCCAGGTG CCGAAGGCAC ATTAGGCTTT ACCGCGCTGG ACATTCGTCG TGCCGACGAT GCGGTAACTT GGTCTGTGAG CCAAGATAAG GCCCGTAGCA TGGATGTGAT CGATGTTAAG CTCAACATTG CGCCTAACTT AGAGACACAG GATCGTAACT ATAAGTTCGA AATGAAGCTG CCGGAAGGTA TGCGTTTAGC GACTGGAACG ATCAAAACCA ATAACGATGA AGTCGCCACA GCGATCGTTG CCGATGAACA CACCTTAACC CTGAGCGGTT TACAGTTGTC GACTCGTAAC GTTGAGCGTG AGTACAAGGT CAGCACTAAC TTAACTGACA AGATGTGTCA CACGCCGATC ATCGATGAGT ACTCTAAGGG TGGTTATATC GATCTGTGGG GCGAGTTCCG CATCCAACCT AACGCAGACT GGTTTGTCGG TGACTTTAAC AACGCATTCG ATGTGCCTAT CAATTGGTTA TTCTACAAAC AAGACGCCAA GTTTGAAGTC TACAACCAAC CTAACGCGGG CTACATGCGT ATGCATACCG TGGGGGCGTT GCAGTTCAAC ACTGGTTACT GGTACATGTC ACAGCACCGT GGTCCTGGTT TCTTGAACGA AGCATTGGCA CCATTCTGGC GTGGTACTTT CACCAGCAAA TATCGTCGCG ATCCTTCTTC ACCCTGGGGG TTAACCATCG CGAGTCAGTA TGCTGCAGAG CGTCCAGATC TTGGGGATCT TCTGTTCCTC GAGTTTGATA ATGTCACCGA CACTAAAACG GGCGAAGAGT TTGACTTTGA AACCATTTTA CGCAGTGGTA TCGATGATCG CCCAGGCCAA TTCGAAATCA TTTATGCCTA TAGCAACTTA GGTGAAAATG TGGCGAAAGG GGCCGTGTTT GTGGAAGGGT TTGATTCTCC ATGGTCAAAA ACCGTTGGTC CAAAAAATGG CACGCTATAC GAGGTCTTAG GTTTCGATGA CTTAGACGAA AAACTGCAAA ACGATCTCGT GGTCTGTTAC GACTACGTTG GTCCTGAGCA GAGCCGTATG GAAGTCAGCT TTAAAGTAGC TGTACAACCT GAAGCCACGG GTAAGACGCT GGATCTTGAG CTGAACTACG ATCTTGAAGG TGCAACACCC ACTAGCTTAG TGCATACAGT GGCAGTGAAT GGCAATATCA AGTTAGTGCC AATCGCCAAC CAAGTTGTGG CTGAAAACAC CCGTCTTGAA GGACTAAGCG TATCCTATGT GGATGCGAAC AAGGTCCCTA ATACGGTTGA AGTTTCTGGC GAGCACATTA GTGCAGAGAT CAACGGTAAT GATTTTACCC TGATCCCAGA AGCTAACTTC CACGGCGACA CTTTAGTCAC AGTGACGATA CGTGATAACG AAATCGGTTC AGATGCCGCC AGCACCAGCT TTATGCTGAC GGTTGAGTCT GATGGTGTTG AACCTCCACC AGTCACCCCT GTGACTCCCG ATAAGCCGGA GCCTGAATCT AGCTCAGGTG GTGCCTTAGG TTGGAGCTTG CTCAGCTTGC TTTCTATGGC GTTTATTCGC CGCGCTAAAA AAGCCACTCG TGCTTAA
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Protein sequence | MNNLQFKRSA IASLTALYVS GACTFALAAP GMEKVAGSSF YTPTFTAEDV LKVTNERKAE LSGDIYVGTP GQLNRVKKAR TPEEIFQPEA SSQGVQTYIV QLDAEPLATY EGDIPGFAAT KAPVNRSIIA KGRVSVNTAA AQSYKSFLLG KQDKFVSRVR QAGVNLKINK QFTIASNALV VEMTQEDAIR MSHQAGVKRI SPNRIFELRT DRGPEFIGAD QMWQGTATQG GLPVKGEGMV VGIIDTGINT DHVAFADDEE YARLNPYKGQ AIGDCGAFPE LCNNKLVGLH SYPEITDVYA APEFQTSSGA KKRIRPANAE DYAGHGSHTA STVAGNTLKD TPLQGFTGDK VSDGVDVPFT FPQTSGVAPR AHIIAYQVCW PGSSGDPYAG CPESAILSAF EDAIADGVDA INFSIGGAEN MPWGDPMELA FLSAREAGIS VAAAAGNSGA FWTADHSSPW VTTVGASTHD RKLKAGIKSI TAFEGTGKPT TAIQGTSFSG SITGEVVLAE KYADPNPNDS YKAASCNVPF PAGTFTSDQI VVCERGDIAR IEKAKNVAAG GAGGVILQNM SSSVDNLEAD MYVIPGIQVK YTDRLKIRNW VLKNPGTARA TITDFTNDYS FDASAGNNLA TFSSLGPSKT NNTLVPDLTA PGVDIYAANA DDQPFTNNPS ASDWTFMSGT SMAAPHVTGA MTLLTQLHPD WTPAEIQSAL MLTAGPVVLN TGYELIEPYY NFMAGAGAIN VARAADTGLV MDETIENYRN ADPTNGGVVN WLNLPSMVEM ECEKTCSWMR TVKATRDGTW TVEGVGKEEG FEVSVSPASF SLKAGESQSI IITAKTPNLI EHKVEPEDGS SPWSAVLNQN TFFNGQVLLK EVNSSSPDVH MPVVVASVAE QLPISHRFEI SRDQGTESLV VNTDSYSQLT PRFYGPVKPE IASSKLTAVS AILSKANIDK GWDIRPLVVP EGTKRLVVEV QKAEQVSTLE NLNPRYTQLH PFIMVGLDKN GSNTFVPEGD SPTSSEIRAE YIDELMCIST SQSEHNYCSF ESPTPGTYWI ATAMAYASGQ GDVAIETGYA LVMENDDKGY LSMSGPASHD GNGNYEIGLN WNIPETKAGD VYYGGFDLGN MPGAEGTLGF TALDIRRADD AVTWSVSQDK ARSMDVIDVK LNIAPNLETQ DRNYKFEMKL PEGMRLATGT IKTNNDEVAT AIVADEHTLT LSGLQLSTRN VEREYKVSTN LTDKMCHTPI IDEYSKGGYI DLWGEFRIQP NADWFVGDFN NAFDVPINWL FYKQDAKFEV YNQPNAGYMR MHTVGALQFN TGYWYMSQHR GPGFLNEALA PFWRGTFTSK YRRDPSSPWG LTIASQYAAE RPDLGDLLFL EFDNVTDTKT GEEFDFETIL RSGIDDRPGQ FEIIYAYSNL GENVAKGAVF VEGFDSPWSK TVGPKNGTLY EVLGFDDLDE KLQNDLVVCY DYVGPEQSRM EVSFKVAVQP EATGKTLDLE LNYDLEGATP TSLVHTVAVN GNIKLVPIAN QVVAENTRLE GLSVSYVDAN KVPNTVEVSG EHISAEINGN DFTLIPEANF HGDTLVTVTI RDNEIGSDAA STSFMLTVES DGVEPPPVTP VTPDKPEPES SSGGALGWSL LSLLSMAFIR RAKKATRA
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