| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0500 |
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| Symbol | |
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| ID | 4251746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 573209 |
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| End bp | 575602 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638117059 |
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| Product | fatty acid cistrans isomerase |
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| Protein accession | YP_732637 |
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| Protein GI | 113968844 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCGA TAAACGCAAT CTGGAAACGT TGGCTCTTAG CCATAGTATT AGCGGCCTCG
GGTTGTGCTA GCGTTGCCCA GGTGGATTTC GACAGTCTTT ATGGTAAAAG CTCGCCGCAG
ACGCGGGCCG ACAATCGGCC AATCCAGAGT GAACTCACTT CACAAACAAA GGCTTATCAC
TCGACTGTTG AACCTATCAT CAACAGTCGC TGCGTGGTTT GCCATGCCTG TTACGATGCG
CCCTGCCAGC TTAAAATGAC TTCCAGTGAG GGCATTGAAC GGGGCGCGAA CAATGAAAAA
GTCTATCAGG GCACCCGTTT GATGGCGGCA ACGCCGAATC GGTTATTTGT CGATGCCCAC
ACACCTGAAG CATGGCGCGA ACGCGGGTTT TATCCCGTGC TCAATGAGCG CGCCCAGACC
CCGCTGGCCA ATACCCAGGC CTCAGTGCTG GCGCGGATGT TAACGCTAAA ACAGGCCCAT
CCCCTGCCGG ACACTAAACA CCTCGATAAA AGCTTCGACT TTAGCCTCGA TCGGGTTCAG
CAATGCGCCA GCATTGAGGA AATGGACAAA TACGAACAAT ACCAACCGCT TGCGGGTATG
CCCTACGGCT TACCTGCGCT CAATCAGCAG GAACATAAGG TATTGATGCA ATGGCTCGAA
CAGGGCGCAG TGTTGTCGAC GCCACCCGCG CTTAGCGCCG AGTTCAATCA AGAAATCGCT
CGTTGGGAGC AGTTCTTAAA TGCCGACAGC CTCAAGGCGC AACTGAGCGC CCGTTATATT
TACGAGCACT TATTTGCCTT CCACCTGTAT TTTGAGTCAT TAACCGCGGC CGATGCTCCT
GCGGCTTACT TCGAGTTAGT GCGCTCACGC ACACCGCCGG GCAAACCGAT TGATCTGATT
GCCAGCCGCC GTCCCTTCGA CGATCCGCAA GTGTCGCGGG TGTATTACCG CTTTCAGCCC
TATCACGCCA CGATCGTCGA TAAGACCCAT ATTCCCTACG CCTTGAATAA CACTGTGCTG
CAAAACTGGC AGCAGTGGTT TATCGACGCC CAATACCAAG TCAGCTCGCT GCCCAGCTAT
GCGCCGAGCG TATCGGCCAA CCCTTTCGAG GCCTTTATTC AACTGCCCGC AGGCTCGCGC
TATCGCTTTA TGCTTACCCG CGCCCAAGAC ACTATTATGG GCTTTATCAA GGGGCCGGTT
TGCCGTGGTC AGGTCGCCCT CAATGTGATC AACGATAGAT TTTGGGTTTA CTTTGTCACC
CCAGAATATA TGGACGATAG CGACTTTACC GACTTCTACC ACGGCCAAAT CGAGAACCTA
CGCATGCCTG CTGAGGAAGA AAGCACCGCC CTTGCCGTGA CCTGGGTGAA ATATGCCGCC
AAACAGGGCG AGTATATGCG GGCACGAAAT CAGTTTTTAA ATCATAAGTT TAAAAATGGT
CGCCACCTCA CTATCGACGG CCTATGGGAT GGCGACGGCA ACAATGATAA TGCCAGCCTG
ACGGTATTTA GGCATTTCGA TAATGCCACT GTGGTGAAAG GGTTAGTGGG AGAATCCCCT
AAGACGGCTT GGGTGATCGA CTATGCCCTG CTAGAGCGTA TTCACTACCT TTTGGTCGCG
GGTTTCGATG TGTATGGCAA CTATGGCCAC CAGCTACTCA CCCGCCTGTA TATGGATTTT
TTACGGATGG AGGGCGAGTC TAACTTCTTG ACCTTATTAC CCCAAGAGGA GCGCCGTAAG
CAGTTTAAGG ATTGGTATCA GGATGCGGGC ACCCAGTTGA CCGCCTTTAT CGCGGGGGAT
ATTAATACCT TCAATCAGCC CACGGGCGTG CTCTACTACA CGGACGATCT AAAAGCCGAA
CTCTACCAAA AGTTGGCCGC TAAGGTCGGC GAGGTTCAGC CCCAACGCTA TCAAATCGCA
CTCAGTCAGT TGCAACCTAA CAGCAAGGCA TTGTTGCAGG CGCTAGGCAG AGTCAAAGGC
ACGCAAGCGA CCCTTTTGCC CGAGCTGACG ATGATCATGA TTGAGCCTGA AAAAACGGGC
AAAGCGGAAA TCTTTACCTT AGTACGTAAC AGTGCCCATC GAAATATTTC GAGCCTATTC
AGTGAGGAAA GCAACCGCGA TCCCGCCAAG GATGATGTCA CGCTAGTGCG CGGGCTATTG
GGTAGTTATC CCGAAGCCTT CTGGCATATT AAGGAGCAAG ACTTAGCCAA AGTTGTGGCT
AAAGTCGAAG GCATGCAAAC CGAAAAAGAC TACGAGGCGT TATTGGATTT GGCGGCAGTG
CGCCGCACCG ATCCGCGTTT CTGGGCCTTT AGTGACAAAC TTAACCAAGC CTTTTTCGAC
AGTCACCCGA TTGAGAGCGG TTGGCTGGAC TACAATCGGC TGCAAAATCG CTAA
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| Protein sequence | MNPINAIWKR WLLAIVLAAS GCASVAQVDF DSLYGKSSPQ TRADNRPIQS ELTSQTKAYH
STVEPIINSR CVVCHACYDA PCQLKMTSSE GIERGANNEK VYQGTRLMAA TPNRLFVDAH
TPEAWRERGF YPVLNERAQT PLANTQASVL ARMLTLKQAH PLPDTKHLDK SFDFSLDRVQ
QCASIEEMDK YEQYQPLAGM PYGLPALNQQ EHKVLMQWLE QGAVLSTPPA LSAEFNQEIA
RWEQFLNADS LKAQLSARYI YEHLFAFHLY FESLTAADAP AAYFELVRSR TPPGKPIDLI
ASRRPFDDPQ VSRVYYRFQP YHATIVDKTH IPYALNNTVL QNWQQWFIDA QYQVSSLPSY
APSVSANPFE AFIQLPAGSR YRFMLTRAQD TIMGFIKGPV CRGQVALNVI NDRFWVYFVT
PEYMDDSDFT DFYHGQIENL RMPAEEESTA LAVTWVKYAA KQGEYMRARN QFLNHKFKNG
RHLTIDGLWD GDGNNDNASL TVFRHFDNAT VVKGLVGESP KTAWVIDYAL LERIHYLLVA
GFDVYGNYGH QLLTRLYMDF LRMEGESNFL TLLPQEERRK QFKDWYQDAG TQLTAFIAGD
INTFNQPTGV LYYTDDLKAE LYQKLAAKVG EVQPQRYQIA LSQLQPNSKA LLQALGRVKG
TQATLLPELT MIMIEPEKTG KAEIFTLVRN SAHRNISSLF SEESNRDPAK DDVTLVRGLL
GSYPEAFWHI KEQDLAKVVA KVEGMQTEKD YEALLDLAAV RRTDPRFWAF SDKLNQAFFD
SHPIESGWLD YNRLQNR
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