Gene Shewmr4_0491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0491 
Symbol 
ID4250915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp563065 
End bp563739 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content54% 
IMG OID638117050 
Productformate-dependent nitrite reductase, NrfG protein 
Protein accessionYP_732628 
Protein GI113968835 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4235] Cytochrome c biogenesis factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGTT TAGGATTCAG CATAGCACTT CTGTTAAGCG GGTTTGTGGC TTGGATTTTC 
TGGCAGCACG CGCGTTTAAA CCAGCGGCAA ACGCTGGTGG GAGAGTCTCA AGTCTCCCAT
GGTGTGCCTG TGCTGTGCAG TGCGCTGCTG TTGCTACTTA CGCTCGCCAT CTATAGCCAA
ACGGGGCGTT ATCAGGATTG GAACACAGGC AAGCTCAATG AAAACATTGA CTATTTAGTG
GCTGCCGACA TCACCAAAGC CCTGCGCCTC GTGGATGAAC AACCGCAAAA CCCGTTGGCA
TTACAGGCGC TTGCCGAGGC TTATAGCGCC GGTGGCTTAT ATGCCGATGC GGTGCAGACC
CTAGACAAAC AGCTTGCGTT GGTGGGGGAG GATGCAGAGG TGCTCGGCGC TAAGGCCAAT
GCCCTCTATT ACCGCGATGG CCGCCAAATG ACCGCAGAGA CCCAAGCACT GATTGCACAG
ATCTTGGCGC TCGCGCCCTT CGAGCCACAG ACGCGGATGC TACAGGCCAA CGATGCCTAT
CTCCATGGGC GCTACCAAGA GTCGATAGAC CATTGGCAAG CATTACTGGC GCAGCCAAGG
GCAGAGATTA ATCGTGAGGC CCTGTTAAAC GCCATCGGCA AGGCCCAAAG CAAATTGAAT
GAAAGTGGAT ATTAA
 
Protein sequence
MASLGFSIAL LLSGFVAWIF WQHARLNQRQ TLVGESQVSH GVPVLCSALL LLLTLAIYSQ 
TGRYQDWNTG KLNENIDYLV AADITKALRL VDEQPQNPLA LQALAEAYSA GGLYADAVQT
LDKQLALVGE DAEVLGAKAN ALYYRDGRQM TAETQALIAQ ILALAPFEPQ TRMLQANDAY
LHGRYQESID HWQALLAQPR AEINREALLN AIGKAQSKLN ESGY