Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0485 |
Symbol | |
ID | 4250909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 555838 |
End bp | 556422 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638117044 |
Product | redoxin domain-containing protein |
Protein accession | YP_732622 |
Protein GI | 113968829 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCTT ACACCGCCAA GCTCGCTCTC CTTTGCACCG CATGGCTGCT GAGCTGCGCC GTTCAGGCCC ATTCACTGCA AAACAAACTC TACGACACGG GTGATCCCAT CCCTAAACCC AGAGTCATGA CTGGCTTTAT CGAGATGCAG CATGCCCGCG GCGTGCCCGA AGTGCCTTTT ATCGATGAAG CTGGGCAGGC ACACAGCTTA AAACAACACC AAGGCAAACT GACCTTAGTG AATCTGTGGG CGACTTGGTG CGTGCCCTGC TTACGGGAAA TCCCTGAGCT GCAAAAACTC CAGCAACAAT ATGTCGATAA GAACATTGCC ATAGTGCCCA TCTCGATTGA TGAAGAAGTA AAAGATGTAC GACCATTTTT GGATCAGCAT GGCTTTAACG ACTACCGCAC TTGGCTCGAC CCAGACAAAA ACATCGAGCA GATCATCCCA GCCAACGTTG TCCCCGCTAC CTATGTTTTT GATGCTAAAG GCAACCTAGT CGGTTTTGTC CGTGGCTATC TCGATTGGAC CGATAAAGAG GTTGCGCCCT ATTTGGATAA GCTTATCGCT AAATATGCCC AGTAA
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Protein sequence | MKSYTAKLAL LCTAWLLSCA VQAHSLQNKL YDTGDPIPKP RVMTGFIEMQ HARGVPEVPF IDEAGQAHSL KQHQGKLTLV NLWATWCVPC LREIPELQKL QQQYVDKNIA IVPISIDEEV KDVRPFLDQH GFNDYRTWLD PDKNIEQIIP ANVVPATYVF DAKGNLVGFV RGYLDWTDKE VAPYLDKLIA KYAQ
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