Gene Shewmr4_0485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0485 
Symbol 
ID4250909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp555838 
End bp556422 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content50% 
IMG OID638117044 
Productredoxin domain-containing protein 
Protein accessionYP_732622 
Protein GI113968829 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCTT ACACCGCCAA GCTCGCTCTC CTTTGCACCG CATGGCTGCT GAGCTGCGCC 
GTTCAGGCCC ATTCACTGCA AAACAAACTC TACGACACGG GTGATCCCAT CCCTAAACCC
AGAGTCATGA CTGGCTTTAT CGAGATGCAG CATGCCCGCG GCGTGCCCGA AGTGCCTTTT
ATCGATGAAG CTGGGCAGGC ACACAGCTTA AAACAACACC AAGGCAAACT GACCTTAGTG
AATCTGTGGG CGACTTGGTG CGTGCCCTGC TTACGGGAAA TCCCTGAGCT GCAAAAACTC
CAGCAACAAT ATGTCGATAA GAACATTGCC ATAGTGCCCA TCTCGATTGA TGAAGAAGTA
AAAGATGTAC GACCATTTTT GGATCAGCAT GGCTTTAACG ACTACCGCAC TTGGCTCGAC
CCAGACAAAA ACATCGAGCA GATCATCCCA GCCAACGTTG TCCCCGCTAC CTATGTTTTT
GATGCTAAAG GCAACCTAGT CGGTTTTGTC CGTGGCTATC TCGATTGGAC CGATAAAGAG
GTTGCGCCCT ATTTGGATAA GCTTATCGCT AAATATGCCC AGTAA
 
Protein sequence
MKSYTAKLAL LCTAWLLSCA VQAHSLQNKL YDTGDPIPKP RVMTGFIEMQ HARGVPEVPF 
IDEAGQAHSL KQHQGKLTLV NLWATWCVPC LREIPELQKL QQQYVDKNIA IVPISIDEEV
KDVRPFLDQH GFNDYRTWLD PDKNIEQIIP ANVVPATYVF DAKGNLVGFV RGYLDWTDKE
VAPYLDKLIA KYAQ