Gene Shewmr4_0470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0470 
Symbol 
ID4250805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp532446 
End bp533759 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content44% 
IMG OID638117029 
Producthypothetical protein 
Protein accessionYP_732607 
Protein GI113968814 
COG category[R] General function prediction only 
COG ID[COG1373] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGCA ACCTACTCAA CGCCTTAATA GCATGGAAAA ACCAACCTGT GCGCAAGCCA 
TTATTGATCG ATGGCGCAAG GCAAACGGGT AAAACCTATC TGCTGCAAGA GTTGTTTGGT
AACACCTTTG CCAACATCCT GCGTATCGAC TTTCTTGAAA ATCCCGCCTA CAAACAAGCA
TTCGATGGCT CACTGTCACC AGACGAGCTA ATAATGAACA TTGAGCTGTT GACCAATCAG
GCGTTCAACC CAGAAACCGA TCTGCTGATA TTAGATGAAA TTGGCGAATG TGAGCGTGCC
GTTACCTCAC TAAAGTATTT TGCTGAAAAA GCACCGTCCT ATTTTGTCGC GGCAAGCGGC
TCGAACATTG GTTTGCTCAA CACCTTCCCT GTAGGTAAGG TAGAACAATA CAATTTACGA
CCTCTGACCT TCCAAGAATT TATTTACGCA TCCAACGAGC AAGCACTGAT CAAAGCGTTT
GAAGCCCAAG CAAGCACACC GGCAGCGCAC ACTAAATTGA TGGATAAACT TACAGATTAC
TTTTTTACCG GTGGTATGCC AGAAGCCGTT TCCGCTTGGT ATAGGTTTAA AGATTCAAGC
ATTTTAGAGC GGGTTGAAAA AGTCACAAAA ATTCATGCCG ATTTAGTTGA AGGTTATCGC
CGCGATTTTG GCAAGTACGC GGGCAAGGTC GATGCCACAC TGATTGAATC TGTGTTTAAC
AGTATTCCAG CGCAGTTATC ACTTGTCAGC GATGAGTCCG TTAAACGCTT TAAATTTAAA
CATGTGCATG AGCGCAAATC TCGTTATAGC GATTTTGAGA CCGCGATCCA TTGGCTTCAC
TGTTGCCGCT TAGCCTTGCC AAACTACCCT ATTGAAGGGA TACCAAAATC ACCTCTGGCG
GCCTACAAAA AAGAAAATAT GGTTAAACTG TTTCTATTTG ATGTGGGACT GCTCAATCAT
ATGCTAGGCA GCAGTTATAA AGAGATTAAG CAACAAGACT ATGAGTACAA AGGCTATGTG
GCTGAAAACT TTGTGCAGCA AGAGCTCACT GCTATTGGCG TTGACCCAAG CTATTCATGG
AATGACGCCC GGGCCGAAAT CGAGTTTATT TTGGCAACCG ATGAAGGCGT TATCGTCCCT
GTTGAAGTCA AAAGTGGCAA ACGTACAAGA GCCAAATCGT TGGCATCCTA CGTTGAAAAA
TGTGCTCCAA GTAAAACCTT TAAGTTAACG GGCACACAAG GCTCATCGGC GTTAGAACAA
ACCAATATTG TAATGCCTTT GTATTTCACC CAGTATTTAC CACAGAGATG GTAA
 
Protein sequence
MQRNLLNALI AWKNQPVRKP LLIDGARQTG KTYLLQELFG NTFANILRID FLENPAYKQA 
FDGSLSPDEL IMNIELLTNQ AFNPETDLLI LDEIGECERA VTSLKYFAEK APSYFVAASG
SNIGLLNTFP VGKVEQYNLR PLTFQEFIYA SNEQALIKAF EAQASTPAAH TKLMDKLTDY
FFTGGMPEAV SAWYRFKDSS ILERVEKVTK IHADLVEGYR RDFGKYAGKV DATLIESVFN
SIPAQLSLVS DESVKRFKFK HVHERKSRYS DFETAIHWLH CCRLALPNYP IEGIPKSPLA
AYKKENMVKL FLFDVGLLNH MLGSSYKEIK QQDYEYKGYV AENFVQQELT AIGVDPSYSW
NDARAEIEFI LATDEGVIVP VEVKSGKRTR AKSLASYVEK CAPSKTFKLT GTQGSSALEQ
TNIVMPLYFT QYLPQRW