Gene Shewmr4_0463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0463 
Symbol 
ID4250798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp526135 
End bp527628 
Gene Length1494 bp 
Protein Length497 aa 
Translation table11 
GC content54% 
IMG OID638117022 
Productprotein of unknown function DUF853, NPT hydrolase putative 
Protein accessionYP_732600 
Protein GI113968807 
COG category[R] General function prediction only 
COG ID[COG0433] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATACTC TACTCTTAGG TAAAGGTGAG CAACAGGTTC ACTTAAATCT TAAATATGCC 
AACCGCCACG GACTGATCGC AGGCGCCACT GGGACGGGTA AAACCGTTTC GCTGATGACC
CTCGCCGAAG GCTTCTCTCG CCAAGGTGTG CCGGTATTTA TCACCGACAT TAAAGGCGAT
ATCTCTGGGC TTGGCGTCGC GGGCACACCA AACGACAAAC TCTTCCAGCG AGCCGCCGAA
ATCGGGATTG AAGAATATCA AACCGAGGCC AATCCTGTGG TTTTCTGGGA TTTGGCTGGA
GAGCAAGGGC ACCCCTTACG CACAACCGTG AGCGAGATGG GACCCACCCT GCTCGGGCGC
ATTCTCGAAC TCAATGACAC CCAAAGCAGT ATTTTGGACA TAGTGTTTCA ACTGGCTGAT
GACCAAGGTT TATTGTTACT CGATCTCGAC GATCTTCGCG CCATGCTGAA CTTAGTCGCC
GATGAACGTA AAGATATCTC CGCCAAGTAT GGGCTTATCA GCGCCCAGTC CCTCGCCGCT
ATTCAACGCT CGGTCCTCGG CTTGGAGCGC GATGGCGGCA AAGACTTTTT CGGCGAGCCA
GCGCTTCAAC TCGAAGACTT GATGCGCACG AACTTACAAG GGCGCGGCAT TATCAGCCTG
TTAGCCGCCA ATAAGTTAAT CCTGACCCCT AACCTCTATT CCAGCTTCTT ACTCTGGCTG
CTATCAGAAC TCTTTGAAAA CCTACCCGAA GTCGGCGATC TCGATAAACC CAAGTTAGTC
TTCTTTATTG ATGAGGCGCA CTTATTGTTT GAAGGCTGCC CAGCAAGTTT GCTTAAACGC
ATAGAGCAGA TTATGCGGCT TATCCGCTCC AAGGGTGTCG GGGTGTATTT TTGCTCGCAG
TTTCCTGACG ATATTCCCAA CGAGATCTTA GGTCAGCTCG GTAATCGGAT TCAGCATGCC
CTCAGGGCGT ATACCCCAAG GGATCAAAAA GCCGTTAAAA CCGCGGCAGA GACCTTTGTG
CCCAACCCTA AATTGGTGGT CAGCGAGGTA ATTTCACAAC TCGCCGTGGG CGAAGCTTTA
GTCTCGACAC TCGCCGAGAA AGGCGTGCCC ACTATGGTGG AACGCGCCCT GATTGCACCG
CCCCGCTGTC GCATGGGGCC AGCAAGCGCG GAGGAGTTAA ACGCCATTCG AGCCAAGAGC
CCCATCGGCG GCAAGTACGA CACTTTAATC AACCGAGAGT CCGCCTACGA ACGGCTCAAT
CAACGGCACG CCGAAGCGGC CAATGGCGCA GCTAGCACCC AAACCGCGAG TACGCCCGCC
GCCCAAGAAG CGGATCAAGG CTGGTTTAGT GAACTGATCT TCGGCAATAA ACGCCGCCAA
GGATTGGCCG AGACACTCTC CAAACAAGCC GCGCGAACCG TGGGTAATCA ACTCGGCAAA
CAAATATTGC GCGGATTACT CGGCGGCATA CTCGGCAAGT CGACCCGCAG GTAA
 
Protein sequence
MNTLLLGKGE QQVHLNLKYA NRHGLIAGAT GTGKTVSLMT LAEGFSRQGV PVFITDIKGD 
ISGLGVAGTP NDKLFQRAAE IGIEEYQTEA NPVVFWDLAG EQGHPLRTTV SEMGPTLLGR
ILELNDTQSS ILDIVFQLAD DQGLLLLDLD DLRAMLNLVA DERKDISAKY GLISAQSLAA
IQRSVLGLER DGGKDFFGEP ALQLEDLMRT NLQGRGIISL LAANKLILTP NLYSSFLLWL
LSELFENLPE VGDLDKPKLV FFIDEAHLLF EGCPASLLKR IEQIMRLIRS KGVGVYFCSQ
FPDDIPNEIL GQLGNRIQHA LRAYTPRDQK AVKTAAETFV PNPKLVVSEV ISQLAVGEAL
VSTLAEKGVP TMVERALIAP PRCRMGPASA EELNAIRAKS PIGGKYDTLI NRESAYERLN
QRHAEAANGA ASTQTASTPA AQEADQGWFS ELIFGNKRRQ GLAETLSKQA ARTVGNQLGK
QILRGLLGGI LGKSTRR