| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0452 |
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| Symbol | |
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| ID | 4251576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 514987 |
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| End bp | 516159 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638117011 |
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| Product | major facilitator transporter |
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| Protein accession | YP_732589 |
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| Protein GI | 113968796 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAAATG TAGCGTTAAC TCAATCGACT CAAAAGCCAG GACTTTTTGT GCCAGTTACA
GGCTTAAGCC TATTTGCCCT CGCGTCGGGC TATTTGATGA GTTTGATCCC GCTCTCGCTC
AGTTATTTCG AACTCAGCCC AGATCTCGCG CCATGGCTCG CGAGTATTTT CTACCTCGGC
TTATTGCTGG GTGCCCCTTG CATCGCGCCA ATCGTGGCAC GCATCGGCCA CAGCAAAGCC
TTTATTTTAT TTCTCAATAT CTTATTGTGC AGTGTTGTGG TTATGGTACT GCTGCCACAG
GGCGGTATCT GGCTCGCCTC GCGACTCGTT GCTGGTGTCG CGGTGGCAGG AATTTTTGTG
GTCGTCGAAT CTTGGTTGCT TATGGCCGAC ACCCAAAAAC AGCGGGCCAA ACGCTTAGGC
CTGTACATGA CCGCCCTGTA CGGCGGCACG GCAATAGGAC AACTCGCGGT CGATTACTTA
GGTACCACGG GCAACCTTCC CTATTTAGTG GTGATAGGTT TACTGGCCGC CGCCAGTTTA
CCCGCGCTCT TAGTTAAACG CGGTCAACCG CAATCGAGCG AGCAACACTC GATTGCCCTC
TCGGATCTTA AAAACCTGAG TAAACCCGCC GTGGTCGGTT GTTTAGTCTC GGGATTATTG
CTCGGCCCCA TTTACGGCTT ATTGCCTGTT TATGTGTCGC AGGACATGGG ATTTGCCCAG
CAGACGGGGC AATTTATGGC GCTGATCATT ATGGGCGGCA TGATAGTCCA GCCCTTAGTG
AGCTATTTAT CTCCACGCTT CCAGAAGAGT GCCTTAATGG CCGCCTTCTG CTTAATTGGC
GCTGCGGCAC TCTTTTTACT GACACAGAAA TCCCTCGTTG GACTCTGGTT AGGCTTTGTG
TTGCTGGGCG CCTGTGCCTT TGCCCTCTAC CCTATCGCCA TCAGCCTGGC CTGCGATCAT
CTGCCTAGCA GCCAAATTGT GTCTGCAACT CAGATTATGT TGCTCAGTTA TTCCGTCGGT
TCGGTTATCG GCCCAGTTAC AGCGAGTCGC TTTAATCATA TCGAACATGG CTTGTTACTC
TACTTAGCCG CCAGTTTTGT GCTGACATCT TGTTATCTTG GCGCGCGCTT ACTGGTGCGA
AGCAAACCTC GCTTGCCGAC GGCAAAAGCT TAA
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| Protein sequence | MENVALTQST QKPGLFVPVT GLSLFALASG YLMSLIPLSL SYFELSPDLA PWLASIFYLG
LLLGAPCIAP IVARIGHSKA FILFLNILLC SVVVMVLLPQ GGIWLASRLV AGVAVAGIFV
VVESWLLMAD TQKQRAKRLG LYMTALYGGT AIGQLAVDYL GTTGNLPYLV VIGLLAAASL
PALLVKRGQP QSSEQHSIAL SDLKNLSKPA VVGCLVSGLL LGPIYGLLPV YVSQDMGFAQ
QTGQFMALII MGGMIVQPLV SYLSPRFQKS ALMAAFCLIG AAALFLLTQK SLVGLWLGFV
LLGACAFALY PIAISLACDH LPSSQIVSAT QIMLLSYSVG SVIGPVTASR FNHIEHGLLL
YLAASFVLTS CYLGARLLVR SKPRLPTAKA
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