Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0451 |
Symbol | |
ID | 4251575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 513321 |
End bp | 514940 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638117010 |
Product | PepSY-associated TM helix domain-containing protein |
Protein accession | YP_732588 |
Protein GI | 113968795 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTTC GCAGTGATGT GTTAAGGGTG TATCAGTCTA TCCATATTTG GACTGGGATC ATCGCCGGAA TAGTGTTGTT TATCGGTTTC TATGCCGGAT CGCTCACTAT GTTTAAAGGT GCGATTGACG CTTGGTCAAT GCCGCCCTCT GTGACTTTGC CGCAAGTCTC TGCTGATAGG CTCGATGAGT TAGTGTCGCA GGTGTTAGCT CGGGACGATA AGGCGAAAAA CGGCTTTAGT TTGCATTTGA ATGATGAACA TCAGTCGCCG ATGACTTGGT ATCAGCAGGG CTCGGAGCGT GAACTCAGCA TGAGTAACCA GCTTTGGCAT GCCAGCCTCG ACGAGCAGGG GCAATTAGTG ACTCAACTAA GCACCCCAAG CGAGCTGGCC GAGCTGATTG ACCAATTACA CCGCACTGCG GGGATTGCCG GTGAAGTGGG CCACGATCAA GCGGGTGTCT ATGTGCTCGG CGTCGCCGCC TTCTTATATT TCTTGGCGCT GGTTTCTGGG GTGATTTTCT TACTGCCCAC CTTAACTAAA AGCTTTTTCG CCCTACGTAA AGATAAGGGC GAAAGCCGTT TCTGGCTCGA TGCCCACAAC TTAGTCGGCA TTACTAGTTT GCCATTTCAT CTAGTGATCA GTCTGACCGT GATAGTGTTT GCCTTCCATG ATCAGCTTTA CGATGGGCTT AAGCAGGTGG TTTACGGTGA AAAACCGCTG TTTGCCCAAC CCGCACCCGA TAGAACGCCC TATACACTCG CCGATTTGCC TAAGGTCAGC ACAGTTCTGG CTAAGGTGCA GGAGCTCGCC CCCGAGTATC AAGTGCATGA AATGACCTTT ATGAACTTGA ATAATCCTCG CGCGACCTTG CGTTTAGGCC TGTACAACCC TAGCGGTTTT ATGCGCGGAC CAGTCACCGA TTACTTATAT CTGCATCCCT ATAGCCTCAA GATAACCAAC AGCACCATTG ACCAGAGTGA TAAGGGCATT TGGGCCAGAA CGGTCGCGGT ATTCTTTGGG CTGCACTTTG GCAGTTACGG CGGCGATCTT GGGCGCTGGG TGTATTTCTT TTTAGGCTTG AGCGGCGCCT TTTTATTTTA CAGCGGTAAC TTGTTGTGGC TGGAAAAGCG CCGTAAAAAA CAGGCGAGTG AGCAGACGCG TGCCTGCCGA TTAATGGCGA GCGCCACCGT GGGGATTTGC TTAGGTTCGG TTGCCGCTCT GGCGGTGAGC ATGCTGCTGG GGAAATGGTT CTACTCACAG GTGAGCAATA TTAATCATCT CTATCTGTGG TTGTACTATG TCGTCTTCGC CGCCTTAGTG GCCTATGCCT TCTGGCGCGG CGCGGCTAGG GCGGCACTGC TGATTTTACC TCTGTGCGCC TTGGCGACTC TGGCTATGCC TATTAGCTCT GTGATCGGGC TGTTAGTGCC GAGTCTAGGC TTATGGGCGC CCCATTCTGC GGCAACGCTT GGGGTCGATC TCGTGGCGCT CGGCTTTAGT GGGCTGTTCT ACTATGGATA CCGACTCACG CGCCATCGCT TATTCAATGG CCCGCAGGAC AGTGTCTGGG CGATTCCCAA TAAGGATGCT GTGGTCGAGA CCGCTTCAAA AACAGTTTGA
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Protein sequence | MKVRSDVLRV YQSIHIWTGI IAGIVLFIGF YAGSLTMFKG AIDAWSMPPS VTLPQVSADR LDELVSQVLA RDDKAKNGFS LHLNDEHQSP MTWYQQGSER ELSMSNQLWH ASLDEQGQLV TQLSTPSELA ELIDQLHRTA GIAGEVGHDQ AGVYVLGVAA FLYFLALVSG VIFLLPTLTK SFFALRKDKG ESRFWLDAHN LVGITSLPFH LVISLTVIVF AFHDQLYDGL KQVVYGEKPL FAQPAPDRTP YTLADLPKVS TVLAKVQELA PEYQVHEMTF MNLNNPRATL RLGLYNPSGF MRGPVTDYLY LHPYSLKITN STIDQSDKGI WARTVAVFFG LHFGSYGGDL GRWVYFFLGL SGAFLFYSGN LLWLEKRRKK QASEQTRACR LMASATVGIC LGSVAALAVS MLLGKWFYSQ VSNINHLYLW LYYVVFAALV AYAFWRGAAR AALLILPLCA LATLAMPISS VIGLLVPSLG LWAPHSAATL GVDLVALGFS GLFYYGYRLT RHRLFNGPQD SVWAIPNKDA VVETASKTV
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