| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0447 |
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| Symbol | |
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| ID | 4251571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 509941 |
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| End bp | 511431 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638117006 |
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| Product | permease |
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| Protein accession | YP_732584 |
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| Protein GI | 113968791 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0701] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTATTGA AGAATTTTAT CGATCTGTTT TTAGATTCCG CCCCTTGGCT GTTGCTCGGC
TTGATTCTGG CGGGCCTACT CAAAGTGTTT GTGCCCATGG CTTGGATGCA AAAGCAGCTC
GGCGGGCATG GCTTTAAAAC CGTGGTGAAG GCGGCGTTAT TGGGCGCGCC ATTACCTCTG
TGTTCCTGCG GGGTGATCCC CGCGGCCGTT GGGCTGCGCC GCTCTGGGGC ATCTAAAGCG
GCAACCACCT CCTTTTTAGT TTCCACCCCT GAAACTGGGG TCGACTCTGT AACGGTTTCT
TACGTTTTGC TCGGCCCTTT TATGGCGATA GTACGGCCGA TTGCGGCGAT CACTAGTGCT
ATTGTTGCGG GCCTTTTAGT GGGGCGAGAT GATGACGATG GCAAACCTGC TGCTAAGGCC
GAGGCCCTGT TAGACAAGGC TCAGTCAGAC AAGGCATTCG CTAGCACTGC GCCTGTCGCT
TCATGTTGTG CTTCAAAATC CCCGTCGGCA GAGAAAGTGC TCAAAGCCGA AGCGGTAAAA
AGCTGCTGCG CATCGACTAA GGCGCCCGCA ATCACGCCAG TTAAATCTTC CTGCTGCGGC
AGTGATAACG CGAAAGCGCC AGCAACCGAG CCGAAAATCA AAATGACGCC GATGGCTACG
CCAAGTCTAA TGGCTGCTGG CGGCCCAAGT ATGGGCACTG TCGGTATGGT TAATGCGGCT
AAAGTCAGTG CGGTCAAGGT TGAAAATGCA GGTTCATGCT GTGGTACTCA AACCGCTGCG
CCTGAAAAAA TAGTCGTAGT GAAGAAGGGC GCTTGTTGTG GTAGCTCAAG CGCGAAAACG
GCAGATAGCC ATCAAGCCGA AGGCGAGAGC TGCTGCGCAT CTACACAGGA TATGGCGACC
GAGCTTAAGT CTGAATCTGT GATTGCACGA GTAGGCATAG GTCTTAAATA TGCGGCGACG
GATCTGGTGC GTGACACTAC ACTCTGGTTG CTGGTGGGCT TATTCTTCGC AGCCATAGTG
CAAACCTATG TTCCAGCAGA CTTTTTAGCT AAGTGGGGCG ATGGATTGCT GGCCATGCTG
GTAATGGTGC TAGTGTCTGT GCCTATGTAT ATCTGCGCCA CGGCTTCGAC GCCGATTGCC
GCCGGCTTGC TACTGGCGGG TGTCTCCCCT GGTGCCGTGC TGGTATTTAT GATGGCAGGT
CCTGCAACCA ATATCGCGAC TTTAGGCGTG GTGACTAAGG AGCTGGGTAA GCGCGCGCTC
TATGGCTATC TTGGGGGCGT CTTGGGGGTT GCCTTAGTCG CTGGCGCTTT GGTGAATTAT
CTGGTCGCCA CCTTTGGTTT TGAGGTGATG CCACAGATTG GTGAGCAGCA CCAGATGTTA
CCCGAGTGGT TAGTTGCGAC CTCAGGCATA GTGCTCGCAT TGCTGATGGC GAAAGTGGTA
TTCGAGAAAA TCCCCCGTAG TTGGCTGCGC CGTAGCGACT GCTGCTCATA G
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| Protein sequence | MLLKNFIDLF LDSAPWLLLG LILAGLLKVF VPMAWMQKQL GGHGFKTVVK AALLGAPLPL
CSCGVIPAAV GLRRSGASKA ATTSFLVSTP ETGVDSVTVS YVLLGPFMAI VRPIAAITSA
IVAGLLVGRD DDDGKPAAKA EALLDKAQSD KAFASTAPVA SCCASKSPSA EKVLKAEAVK
SCCASTKAPA ITPVKSSCCG SDNAKAPATE PKIKMTPMAT PSLMAAGGPS MGTVGMVNAA
KVSAVKVENA GSCCGTQTAA PEKIVVVKKG ACCGSSSAKT ADSHQAEGES CCASTQDMAT
ELKSESVIAR VGIGLKYAAT DLVRDTTLWL LVGLFFAAIV QTYVPADFLA KWGDGLLAML
VMVLVSVPMY ICATASTPIA AGLLLAGVSP GAVLVFMMAG PATNIATLGV VTKELGKRAL
YGYLGGVLGV ALVAGALVNY LVATFGFEVM PQIGEQHQML PEWLVATSGI VLALLMAKVV
FEKIPRSWLR RSDCCS
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