| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0437 |
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| Symbol | |
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| ID | 4251911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 493650 |
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| End bp | 496322 |
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| Gene Length | 2673 bp |
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| Protein Length | 890 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638116996 |
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| Product | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase |
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| Protein accession | YP_732574 |
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| Protein GI | 113968781 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1049] Aconitase B |
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| TIGRFAM ID | [TIGR00117] aconitate hydratase 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000175956 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGACT GTCAGCTTCA ATTGAGAAGA CGTGCAGTTT CGTTGTTAGA GCGCCAAACA
AAGAGGAATG TTGCCGTGCT AGAAGCATAT CGTAAACACG TCGCAGAACG TGCTGCAGAG
GGCGTAGTCC CTAAGCCATT AGATGCACAT CAAGTGGCTG AACTGGTTAA ATTGGTTCAA
AATCCCCCCG CTGGTGAAGA AGCCGTTATT CTTGACCTGC TAGAAAATCG AATTCCCCCC
GGTGTTGACG AAGCTGCTTA CGTAAAAGCC GCTTTCTTAG ATGCGGTTGC TAAAGGCACT
GCAACTTCAC CTATCCTGTC TGCCGAACGT GCGACTGAGT TATTAGGCAC CATGCAAGGT
GGCTATAACA TCGAGCCGCT GATCGCTCAG TTAGATAATC CAGCTCTGGC ACCATTAGCC
GTTAAAGCAC TGTCTCACAC TCTGCTGATG TTTGATTCTT TCCACGATGT GGTTGAGAAA
ATGGAAGCGG GTAACGCCTA TGCTAAACAA GTGGTTGAAG CTTGGGCAAA TGCAGACTGG
TACTTAAGCC GTCCAAAATT AGCGGACAAA GTGACTCTGA CAGTATTCAA AGTCTCAGGT
GAAACCAACA CCGACGACCT GTCACCGGCT CCTGATGCTT GGTCACGTCC AGATATCCCG
TTGCACGCCT TAGCTATGCT GAAAAACGCG CGTGATGGTA TCGAGCCAGA TGTACCAGGC
AGCGTAGGTC CAATCAAGAA ATTAGAAGAA CTGAAAACCA AAGGTTTCCC ATTAGTTTAC
GTGGGTGACG TTGTAGGTAC AGGCTCATCA CGTAAGTCAG CGACTAACTC AGTACTGTGG
TTCATGGGCG ATGATATCCC ATTCGTACCT AACAAACGTG CTGGTGGTTT CTGCTTAGGT
GGCAAGATTG CTCCGATTTT CTTCAACACT ATGGAAGATG CGGGCGCGCT GCCAATCGAA
CTTGACGTCA GCAAAATGGA AATGGGCGAT GTAATCGACA TTTATCCATA CGCTGGTGTT
GTTAAGCGTC ATGGCACAGA GGAAGTCATT TCTGAGTTCA GCCTGAAAAC CGACGTATTG
TTAGACGAAG TGCGTGCGGG TGGCCGTATT CCACTGATCA TCGGTCGTGG TTTAACTGAC
AAAGCTCGCG CAGTATTAGG TTTACCTGCT TCTGAAGTAT TCGTACGTCC ACAGGATATC
GCTGATTCTG GCAAAGGTTA CACCCTTGCG CAGAAGATGG TTGGTAAAGC CTGTGGTGTT
GCTGGCGTGC GTCCAGGCCA ATACTGCGAA CCTAAGATGA CGTCTGTCGG TTCACAAGAT
ACTACAGGTC CTATGACCCG TGATGAGCTG AAAGACTTAG CCTGTTTAGG CTTCAGTGCC
GATTTGACTA TGCAGTCATT CTGCCACACT GCGGCTTATC CAAAACCAGT TGACGTTAAC
ACTCACCACA CTCTGCCAGA CTTCATCATG AACCGTGGCG GTGTGTCTCT GCGTCCAGGT
GACGGTGTTA TCCACTCTTG GTTAAACCGT ATGTTATTAC CAGACACAGT TGGTACTGGT
GGTGACTCAC ATACGCGTTT CCCAATCGGG ATTTCATTCC CAGCAGGTTC TGGTTTAGTG
GCATTCGCTG CCGCGACCGG TGTGATGCCT CTGGACATGC CAGAATCAGT ATTAGTGCGC
TTCAAGGGCA AGATGCAACC TGGCATCACC CTACGTGACT TAGTACACGC GATTCCATTA
AAAGCGATTG AAATGGGTCT GCTGACCGTT GAGAAGAAAG GTAAAGTGAA CATCTTCTCT
GGCCGCGTAC TGGAAATCGA AGGCTTAGAA ACCCTGAAAG TAGAACAGGC ATTCGAACTG
TCTGACGCTT CTGCAGAACG CTCTGCAGCG GGTTGTACTA TCAAGTTAGA CAAAGAGCCA
ATCATCGAGT ACCTGAACTC GAACATCACT ATGCTGAAGT GGATGATCGC CGAAGGTTAC
GGTGACCGTC GTACTATCGA ACGTCGTATC AAAGGCATGG AAGAGTGGTT AGCGAATCCT
GAGCTGATGA GCGCAGACGC CGATGCCGAG TACGCTGCGG TGATCGAAAT CGATCTGAAC
GAGATCAAAG AGCCAATCCT GTGTGCGCCA AACGATCCAG ACGATGCAGT ATTGCTGTCA
TCTGTTGCGC AAACTAAGAT TGACGAAGTG TTCGTGGGTT CTTGTATGAC TAACATCGGT
CACTTCCGTG CGACCGGTAA GATGTTAGAC AAGTTCGCTA AGACGCTGCC AACACGTCTG
TGGATTGCAC CACCGACGAA GATGGACAAA GACCAGCTGA CCGAAGAAGG TTACTACGGT
ATTTTCGGTC GCGTTGGTGC GCGTATCGAG ATCCCAGGCT GTTCACTGTG TATGGGTAAC
CAAGCACGTG TGGCTGAAGG TTCTACTGTG GTATCGACTT CTACCCGTAA CTTCCCGAAC
CGTTTAGGTA CAGGCGCTAA CGTTTACTTA GCTTCTGCGG AATTAGCGGC AGTAGCAGCC
CTGTTAGGTC GTCTGCCATC GGTTGAAGAA TACCAAGAAT ACGCTAAAGA GTTAGATGCA
ACTGCAGCTG ACACTTACCG TTACTTGAAC TTCGATCAGA TCGATTCTTA CACTCAGAAA
GCATCACAAG TGATCTTTCA ATCAGCTGTA TAA
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| Protein sequence | MSDCQLQLRR RAVSLLERQT KRNVAVLEAY RKHVAERAAE GVVPKPLDAH QVAELVKLVQ
NPPAGEEAVI LDLLENRIPP GVDEAAYVKA AFLDAVAKGT ATSPILSAER ATELLGTMQG
GYNIEPLIAQ LDNPALAPLA VKALSHTLLM FDSFHDVVEK MEAGNAYAKQ VVEAWANADW
YLSRPKLADK VTLTVFKVSG ETNTDDLSPA PDAWSRPDIP LHALAMLKNA RDGIEPDVPG
SVGPIKKLEE LKTKGFPLVY VGDVVGTGSS RKSATNSVLW FMGDDIPFVP NKRAGGFCLG
GKIAPIFFNT MEDAGALPIE LDVSKMEMGD VIDIYPYAGV VKRHGTEEVI SEFSLKTDVL
LDEVRAGGRI PLIIGRGLTD KARAVLGLPA SEVFVRPQDI ADSGKGYTLA QKMVGKACGV
AGVRPGQYCE PKMTSVGSQD TTGPMTRDEL KDLACLGFSA DLTMQSFCHT AAYPKPVDVN
THHTLPDFIM NRGGVSLRPG DGVIHSWLNR MLLPDTVGTG GDSHTRFPIG ISFPAGSGLV
AFAAATGVMP LDMPESVLVR FKGKMQPGIT LRDLVHAIPL KAIEMGLLTV EKKGKVNIFS
GRVLEIEGLE TLKVEQAFEL SDASAERSAA GCTIKLDKEP IIEYLNSNIT MLKWMIAEGY
GDRRTIERRI KGMEEWLANP ELMSADADAE YAAVIEIDLN EIKEPILCAP NDPDDAVLLS
SVAQTKIDEV FVGSCMTNIG HFRATGKMLD KFAKTLPTRL WIAPPTKMDK DQLTEEGYYG
IFGRVGARIE IPGCSLCMGN QARVAEGSTV VSTSTRNFPN RLGTGANVYL ASAELAAVAA
LLGRLPSVEE YQEYAKELDA TAADTYRYLN FDQIDSYTQK ASQVIFQSAV
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