| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0422 |
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| Symbol | |
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| ID | 4251965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 468345 |
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| End bp | 468716 |
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| Gene Length | 372 bp |
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| Protein Length | 123 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638116981 |
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| Product | methylation site containing protein |
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| Protein accession | YP_732559 |
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| Protein GI | 113968766 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.261245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCAA CGAACCAAAC GTTAAATAAA AAGGCTCAGG GTTTTACTCT GATTGAATTA
ATGATCGTCG TCGCGATTAT CGGTATTTTG GCTGCAATCG CACTGCCTGC GTATAAAGAA
TACGTCAACA AAAGTAAAAT CAACTCCTGC TTAAGCGAAG CCAGTGCTTG GACCAAAGCA
GCTTCCGCAG CAGTTATAGG TGAAACAACA GTACCAGACT ACAAAGCAGT GTCATGCGCT
GACACAAGTA CCCCCACCAC ACCGACAGAT CTGGCTTCAT TATCAGGTCC AGAAACCTTC
ACTGCAGAAG ATGAGACTGG GACAACAATT ACTTGTGATT GGGGTACTGC AACCTGTTCA
GCTGGCTCTT AA
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| Protein sequence | MKATNQTLNK KAQGFTLIEL MIVVAIIGIL AAIALPAYKE YVNKSKINSC LSEASAWTKA
ASAAVIGETT VPDYKAVSCA DTSTPTTPTD LASLSGPETF TAEDETGTTI TCDWGTATCS
AGS
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