| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0419 |
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| Symbol | |
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| ID | 4251962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 463685 |
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| End bp | 464950 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638116978 |
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| Product | type II secretion system protein |
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| Protein accession | YP_732556 |
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| Protein GI | 113968763 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACGG CAACGACAGT AAAAAAGCCT CGTGCCAAAA AGAACGAGCA AAAAAGCCAA
CCTAAGATCT ATACCTTTGA GTGGAAGGGC TTAAACCGTG ATGGCAAAAA AACCGGTGGC
GAATTAAAAG GCACCAGTGT CGCCGAGGTG AAAAGTCAGC TTAAGCTCCA AGGGGTAAAC
CCTAAAGTTG TACGCAAAAA AGCATCACCT CTTTTCGCTC ACAATCCCGA TATCAAACCT
ATGGATATCG CCATGGTAAC ACGCCAAATA GCGACTATGC TGGCAGCAGG TGTCCCCTTA
GTCACCACAA TAGAAATGCT CGGCCGCGGC CATGAAAAGC AAAAAATGCG CGAGTTACTC
GGTACTATAT TGTCAGAAGT ACAATCGGGT ATTCCACTAT CAGACTCACT ACGCCCCCAT
AGACGTTATT TTGATGATCT CTACGTCGAT CTTGTCGCAG CGGGTGAACA TTCAGGCTCT
CTTGATGCAG TGTTTGACCG AATTGCAACA TACAGAGAAA AAGCCGAAGC CTTAAAGTCG
AAAATTAAAA AGGCGATGTT TTACCCTGCC GCAGTCGTTG TGGTAGCGAT AGCAGTAACA
ACACTGCTTC TGTTGTTTGT TGTACCGCAA TTTGAATCAA TTTTTGCAAG CTTTGGTGCA
GAGCTTCCAG CTTTTACCCA GATGATCGTT GGCATTTCGC GTTTTTTACA GAGTTCTTGG
TATATATTCT TCGCAGCCAT AGCTATCAGT ATCTGGTTAT TTGTCCGTGC CCACCGCAAT
TCACAAATGT TTAGGGATCG AATAGATGAA CTTGTGCTTA AGATTCCCAT TATCGGTGAG
ATATTGCATA AAGCAGCCAT GGCACGATTT TCCCGCACCT TAGCCACCAC CTTTGCGGCA
GGGGTGCCTT TAATCGATGG TATGGAGTCA GCTGCCGGCG CCTCTGGCAA CGCGGTTTAT
CGATCGGCAC TATTGAAAGT ACGCCAAGAA GTGATGGCTG GGATGCAGAT GAACGTCGCC
ATGCGTACCA CAGGGCTTTT CCCCGATATG CTGATCCAAA TGGTGATGAT CGGTGAAGAG
TCTGGCTCAC TCGATAGTAT GCTCAATAAA GTAGCCAATA TTTATGAAAT GCAGGTCGAT
GATGCCGTTG ATGGCTTATC AAGCCTTATC GAGCCCATTA TGATGGTAGT CATTGGCATC
TTGGTCGGCG GTTTGATTGT CGGTATGTAT CTACCGATTT TCCAAATGGG TAATGTCGTA
GGTTAA
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| Protein sequence | MATATTVKKP RAKKNEQKSQ PKIYTFEWKG LNRDGKKTGG ELKGTSVAEV KSQLKLQGVN
PKVVRKKASP LFAHNPDIKP MDIAMVTRQI ATMLAAGVPL VTTIEMLGRG HEKQKMRELL
GTILSEVQSG IPLSDSLRPH RRYFDDLYVD LVAAGEHSGS LDAVFDRIAT YREKAEALKS
KIKKAMFYPA AVVVVAIAVT TLLLLFVVPQ FESIFASFGA ELPAFTQMIV GISRFLQSSW
YIFFAAIAIS IWLFVRAHRN SQMFRDRIDE LVLKIPIIGE ILHKAAMARF SRTLATTFAA
GVPLIDGMES AAGASGNAVY RSALLKVRQE VMAGMQMNVA MRTTGLFPDM LIQMVMIGEE
SGSLDSMLNK VANIYEMQVD DAVDGLSSLI EPIMMVVIGI LVGGLIVGMY LPIFQMGNVV
G
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