| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0418 |
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| Symbol | |
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| ID | 4251961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 462703 |
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| End bp | 463629 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638116977 |
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| Product | type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A |
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| Protein accession | YP_732555 |
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| Protein GI | 113968762 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGACT TTATTTCTCT TTTAAGCCAC TCTCTTGCGC AGAGTCCTTG GCTATTTATT
GCGTTAAGTT TTGTGTTTGC TGCCACTATT GGTAGCTTTT TAAATGTCGT CATTCACCGC
TTTCCGGTAA TGATGAAGCG CGAATGGCAA CAGGAGTGTA ATCAATATCT GCAAGAATAC
CATGTAGATG TGGTAAAGCA GATTGGTATC GAAAAGCTCA ATAAGCCGAT AGATACTTAC
CCTGAAAAAT ACAATCTAGT AGTACCAGGT TCCGCCTGCC CTAAATGTAA AACCGCAATC
AAACCTTGGC ATAATCTGCC GATTGTGGGC TGGTTAATGC TCAGAGGAAA ATGCGCTGCC
TGCGATGCAC CAATATCCTC ACGCTATCCA ATTATTGAGT TAGTAACAGG GTTACTCGTT
GCAACGCTCG CTTGGCATTT TGGTCCTAGC TGGCAATTTG TGTTTGCTGC GGTATTAACC
TTTGTATTGA TTGCATTAAC GGGTATCGAT CTGGATGAGA TGCTGCTTCC CGACCAGATG
ACCCTTCCAC TCCTATGGCT AGGATTACTC ATTAACCTCA ATCATACCTT TACCACGCCA
ACCGATGCCG TTATAGGCGC TGCAGCGGGC TATTTGAGTC TCTGGTCGGT GTTTTGGCTG
TTTAAGCTAC TCACAGGTAA GGAAGGCATG GGGTATGGCG ACTTTAAACT GCTCGCCGTA
TTTGGTGCAT GGCTGGGTTG GCAGATGCTC CCCCTAGTCA TTTTACTGTC CTCTTTAGTT
GGTGCCCTTG TTGGCATCAC GCTCATCGTG CTCAAACGTA ATCAGCTCGC AAACCCTATT
CCCTTTGGGC CTTATATTGC CGCCGCTGGG TGGATAGCAT TGATATGGGG ACAACCCATA
GTCGATTGGT ATCTAAGTAC GCTATAA
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| Protein sequence | MSDFISLLSH SLAQSPWLFI ALSFVFAATI GSFLNVVIHR FPVMMKREWQ QECNQYLQEY
HVDVVKQIGI EKLNKPIDTY PEKYNLVVPG SACPKCKTAI KPWHNLPIVG WLMLRGKCAA
CDAPISSRYP IIELVTGLLV ATLAWHFGPS WQFVFAAVLT FVLIALTGID LDEMLLPDQM
TLPLLWLGLL INLNHTFTTP TDAVIGAAAG YLSLWSVFWL FKLLTGKEGM GYGDFKLLAV
FGAWLGWQML PLVILLSSLV GALVGITLIV LKRNQLANPI PFGPYIAAAG WIALIWGQPI
VDWYLSTL
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