| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0413 |
|---|
| Symbol | |
|---|
| ID | 4251956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 459811 |
|---|
| End bp | 460347 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638116972 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_732550 |
|---|
| Protein GI | 113968757 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACAATA ACGTTAAAGC ATTACTCGCC ACGACCGCGT TATTTTTTAG TTGCCAGGTA
CTGGCAAATG GCGGCTGTGG CTTTGAAGAG CAACAACAGG GCTTGATTGC CACCTGCAGC
GAGGAGAAAC AAGAAGTGAT TTTAACTGGT GTAGTTGAAG CGCAACATTT AGTAAAAGAT
CTCAATGAGT TTGCAGAGGG CTACAAGAGC TATCAGGTGG ATACAGCATC CTTAGCCCCT
CTTAAGAACA TCGCTGAGCC AACCGAAATC GTGGTCATCA TCGGCACTTG GTGCCCAGAC
TGCCATCGCG AAACACCACG CTTTATTCGC ATTATGGAAG AAGTGGCTAA CCCCAATATC
AAAGTGACTT ATATTGGGGT TGATCGCAGC AAGCAAGATC CCGAAGGGCT GGCGGCAAAA
TACGAGTTTA AGCGTATTCC AACCATTATC GTGCTACAGC AAGGTAAGGA AATTGGCCGT
ATCGTTGAAC GCCCAACCGT CTCGCTCGAA AAAGATTTAG TCGAGATATT AAAGTAA
|
|---|
| Protein sequence | MHNNVKALLA TTALFFSCQV LANGGCGFEE QQQGLIATCS EEKQEVILTG VVEAQHLVKD
LNEFAEGYKS YQVDTASLAP LKNIAEPTEI VVIIGTWCPD CHRETPRFIR IMEEVANPNI
KVTYIGVDRS KQDPEGLAAK YEFKRIPTII VLQQGKEIGR IVERPTVSLE KDLVEILK
|
|---|
| |