Gene Shewmr4_0410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0410 
Symbol 
ID4251953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp457012 
End bp457338 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content44% 
IMG OID638116969 
Productthioredoxin 
Protein accessionYP_732547 
Protein GI113968754 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATA AAATTATATA CCTGAGCGAC GACAGCTTCG AAAACGACGT ATTAAAGGCC 
GATTTACCAG TATTGGTAGA CTTCTGGGCT GAATGGTGTG GTCCATGCAA AATGATCGCG
CCAATCCTTG ACGACGTTGC CGAAGAGTAC GCAGGTCGTG TAACTATCGC TAAACTAAAC
GTTGACCAAA ACAACGTTTC TCCAGCGAAA TATGGCGTTC GTGGTATCCC AACTTTACTG
TTGTTCAAGA ACGGTGAATT AGCTGCGACC AAAGTTGGCG CACTGTCTAA AACTCAATTA
AAAGAGTTTA TCGACGCACA AATCTAA
 
Protein sequence
MSDKIIYLSD DSFENDVLKA DLPVLVDFWA EWCGPCKMIA PILDDVAEEY AGRVTIAKLN 
VDQNNVSPAK YGVRGIPTLL LFKNGELAAT KVGALSKTQL KEFIDAQI