| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0409 |
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| Symbol | rho |
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| ID | 4251952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 455535 |
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| End bp | 456800 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638116968 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_732546 |
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| Protein GI | 113968753 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTAA CTGAATTAAA AGACACGCCG ATATCCGACC TAGTCTCGCT AGCCGAAAAT
ATGAAACTCG AAAATATGGC CCGTGCTCGC AAGCAGGACA TTATTTTCTC TATTCTTAAA
GCCCACGCCA AAAGTGGCGA AGACATTTTC GGTGGCGGTG TATTAGAAAT ACTCCAAGAC
GGATTCGGTT TCTTACGTAG TGCAGATGGA TCTTACTTAG CTGGCCCTGA CGATATTTAT
GTATCACCAA GCCAAATTCG CCGCTTTAAC ATGCGAACGG GCGACACCAT TTTTGGTAAG
ATTCGCCCAC CGAAAGAAGG TGAACGTTAT TTTGCCCTGC TAAAAGTTAA CGAAGTTAAC
TTCGATAAAC CCGAAAACTC TCGCAACAAA ATCCTCTTTG AAAACTTAAC CCCACTCCAC
GCAGAAGAAC GTATGCGTAT GGAGCGTGGT AATGGCTCTA CTGAAGACAT CACTGCCCGT
ATTCTGGATT TATGCTCTCC TATCGGTAAG GGCCAACGCG GTCTGATCGT CGCGCCACCA
AAAGCGGGTA AAACCTTATT ACTGCAAAAC ATTGCTCAGT CAATCACCTA CAACAACCCT
GAAGTCGTGT TGATGGTACT GCTGATCGAT GAACGTCCTG AAGAAGTGAC CGAGATGCAA
CGCCTAGTTC AAGGCGAAGT GATTGCATCA ACCTTCGACG AACCAGCCAG CCGTCACGTA
CAAGTGGCTG AAATGGTAAT TGAAAAAGCC AAGCGTTTAG TTGAGCACAA GAAAGACGTT
GTGATCCTAC TCGACTCTAT CACTCGTTTG GCTCGCGCCT ACAACACTGT TATCCCATCA
TCGGGCAAAG TGTTAACTGG TGGTGTGGAC GCAAACGCCC TGCACCGTCC TAAGCGCTTC
TTCGGTGCGG CTCGTAACAT CGAAAATGGC GGCAGTTTAA CTATTATTGC TACCGCACTG
GTTGATACCG GCTCGAAAAT GGACGAAGTG ATTTACGAAG AGTTTAAAGG TACTGGTAAC
CAAGAACTGC ATCTGTCACG CAAGGCCGCT GAAAAACGCG TATTCCCAGC GATTGACTTC
AACCGCAGTG GTACTCGTCG CGAAGAAAAA CTGACCACGC CTGATGAACT GCAAAAGATG
TGGATCCTGC GTAAGATCTT AAATCCAATG GATGAAGTCA GCGCAATGGA ATTCCTGATC
GATAAGCTGG CGATGACTAA GACCAACGAA GAGTTCTTCA CCGCAATGAA ACGCGCTAAG
TCTTAA
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| Protein sequence | MNLTELKDTP ISDLVSLAEN MKLENMARAR KQDIIFSILK AHAKSGEDIF GGGVLEILQD
GFGFLRSADG SYLAGPDDIY VSPSQIRRFN MRTGDTIFGK IRPPKEGERY FALLKVNEVN
FDKPENSRNK ILFENLTPLH AEERMRMERG NGSTEDITAR ILDLCSPIGK GQRGLIVAPP
KAGKTLLLQN IAQSITYNNP EVVLMVLLID ERPEEVTEMQ RLVQGEVIAS TFDEPASRHV
QVAEMVIEKA KRLVEHKKDV VILLDSITRL ARAYNTVIPS SGKVLTGGVD ANALHRPKRF
FGAARNIENG GSLTIIATAL VDTGSKMDEV IYEEFKGTGN QELHLSRKAA EKRVFPAIDF
NRSGTRREEK LTTPDELQKM WILRKILNPM DEVSAMEFLI DKLAMTKTNE EFFTAMKRAK
S
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