Gene Shewmr4_0402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0402 
Symbol 
ID4251735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp448546 
End bp449271 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content49% 
IMG OID638116961 
Productfumarate reductase cytochrome b-556 subunit 
Protein accessionYP_732539 
Protein GI113968746 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.243259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGCG TAACGCGCGT TCACACTAGC GTGAAAACAC AGGGGATAGG TCACCCTTGG 
TCGGCTAAGG CCGATAGATT ACAGAGCGCG ACTGGTATTA TGCTGGGCTG CTTTCTGTTG
TTACATATGC ATTTCGAGTC GAGCATTCTG CTGGGTAAAG AGGCCTTTTA CCATGTGGTG
CAGTTGCTCG AAGGCGGTAT GTTTAGCAGT ACAGGCCATG GCTTTCCGAT TGTCACTAAA
GTCTTCTCTG TGTTTATGCT GCTCGTGGTG ATTTTACATG CAGCCGTTGC TCTTAGGCGG
TTTCCGGCGC AGCTTGGGCA GTGGCGAGCG TTGCGATCAC ATTTAGGTGG CATTAAACAT
CGCGATACCC ATGCTTGGTT TTGGCAGTTG ATCACGGGTT TTATTCTGTT TTTCTTGGTG
CCTGTCCACC TCTTTACCAT GATCTTAAAT CCTGAAATTG GTCCACATTT ATCGGCCGAG
CGTGTCTATC ACGATAATGC TTGGTTGCTC TACGCTCTGT TGCTGCCCGC AGTCGTCATC
CACGCCATGA TTGGTTTATA CCGAGTGGCG GTTAAATGGG GCATCACGAC CCAGCGCTCT
GGCTTACGTA AGCTTGCTAA GGTATTGATT ATCTATTTGT TATGCCTAGG TGGTGCGAGC
TTAGTCTCCT ATATGTTTAT CGGTAGTGAG CTAAGTGTGC CGGTGCAGCC TTACGTGCCC
CATTGA
 
Protein sequence
MTSVTRVHTS VKTQGIGHPW SAKADRLQSA TGIMLGCFLL LHMHFESSIL LGKEAFYHVV 
QLLEGGMFSS TGHGFPIVTK VFSVFMLLVV ILHAAVALRR FPAQLGQWRA LRSHLGGIKH
RDTHAWFWQL ITGFILFFLV PVHLFTMILN PEIGPHLSAE RVYHDNAWLL YALLLPAVVI
HAMIGLYRVA VKWGITTQRS GLRKLAKVLI IYLLCLGGAS LVSYMFIGSE LSVPVQPYVP
H