Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0393 |
Symbol | |
ID | 4251726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 441131 |
End bp | 441766 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638116952 |
Product | hypothetical protein |
Protein accession | YP_732530 |
Protein GI | 113968737 |
COG category | [S] Function unknown |
COG ID | [COG3159] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGC CTTTGATGCC GCAGACCGAT CTTCCCTTCG ATGAGTTGAT TATTCGCGAG TACCTACTCG ATAACCCAGA CTTTTTTAAT CGTTATCCCG AGCTGTTACT TGCGATGCGC TTACCCCATT CGGAGCGCGG CGCGATTTCC TTGGTCGAGC GTCGTCAAGA GTTACTGCGC CAACGGGTTG GGCAACTCGA AGAAGAAATC ACCAGTCTGC TGGCGATGGC AGCGCGCAAT GAAAAGATAT TCCTCTTTAA TACCGAGCTG TCTTTTAAAT TACTCAATTG CGTTAATTTA GAAGCCCTTA AAGAAGTGCT GGCCGATAGT TTAAAGACGC AGTTTAATTT TACCCATGTG CGCCTGATCA GCGTGTTAGA TGCTGATGTG GAGATGCAAG TGATTTGGGC TCAGCGTTTG CGCAAGGATT ACTACTTTGG CCGGTTAACC CAGCAAGAAG CGAAACGCCT GTTTGGTAGC GAAGTGGGCT CTGTCGCGTT AGTGAAATTA GCCGATGAGA TCCCGATGAT TTTTGCCGTT GCTAGCCAAG ATGCGGCGCA TTTCCATCCC GATATGGACA ATATGTTGCT CGAACAATTG CGCCGATTAC TCGCACATAT GCTGGCCAAG CTTTAA
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Protein sequence | MTEPLMPQTD LPFDELIIRE YLLDNPDFFN RYPELLLAMR LPHSERGAIS LVERRQELLR QRVGQLEEEI TSLLAMAARN EKIFLFNTEL SFKLLNCVNL EALKEVLADS LKTQFNFTHV RLISVLDADV EMQVIWAQRL RKDYYFGRLT QQEAKRLFGS EVGSVALVKL ADEIPMIFAV ASQDAAHFHP DMDNMLLEQL RRLLAHMLAK L
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