Gene Shewmr4_0393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0393 
Symbol 
ID4251726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp441131 
End bp441766 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content48% 
IMG OID638116952 
Producthypothetical protein 
Protein accessionYP_732530 
Protein GI113968737 
COG category[S] Function unknown 
COG ID[COG3159] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC CTTTGATGCC GCAGACCGAT CTTCCCTTCG ATGAGTTGAT TATTCGCGAG 
TACCTACTCG ATAACCCAGA CTTTTTTAAT CGTTATCCCG AGCTGTTACT TGCGATGCGC
TTACCCCATT CGGAGCGCGG CGCGATTTCC TTGGTCGAGC GTCGTCAAGA GTTACTGCGC
CAACGGGTTG GGCAACTCGA AGAAGAAATC ACCAGTCTGC TGGCGATGGC AGCGCGCAAT
GAAAAGATAT TCCTCTTTAA TACCGAGCTG TCTTTTAAAT TACTCAATTG CGTTAATTTA
GAAGCCCTTA AAGAAGTGCT GGCCGATAGT TTAAAGACGC AGTTTAATTT TACCCATGTG
CGCCTGATCA GCGTGTTAGA TGCTGATGTG GAGATGCAAG TGATTTGGGC TCAGCGTTTG
CGCAAGGATT ACTACTTTGG CCGGTTAACC CAGCAAGAAG CGAAACGCCT GTTTGGTAGC
GAAGTGGGCT CTGTCGCGTT AGTGAAATTA GCCGATGAGA TCCCGATGAT TTTTGCCGTT
GCTAGCCAAG ATGCGGCGCA TTTCCATCCC GATATGGACA ATATGTTGCT CGAACAATTG
CGCCGATTAC TCGCACATAT GCTGGCCAAG CTTTAA
 
Protein sequence
MTEPLMPQTD LPFDELIIRE YLLDNPDFFN RYPELLLAMR LPHSERGAIS LVERRQELLR 
QRVGQLEEEI TSLLAMAARN EKIFLFNTEL SFKLLNCVNL EALKEVLADS LKTQFNFTHV
RLISVLDADV EMQVIWAQRL RKDYYFGRLT QQEAKRLFGS EVGSVALVKL ADEIPMIFAV
ASQDAAHFHP DMDNMLLEQL RRLLAHMLAK L