| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0391 |
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| Symbol | |
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| ID | 4251724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 438992 |
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| End bp | 440236 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638116950 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_732528 |
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| Protein GI | 113968735 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGATCACT TTCTCTACCA AGACAATACC CTGTACGCCG AAGGCTGTCG GGTCAATGAT
TTAGCCCAGC AGTATGGCAC GCCATTGTAT ATCTATTCCC GTGCGACGCT CGAACGTCAC
TGGCATGCGT TTAACAATGC GGTGGCCGAC CATCCACATT TAGTGTGTTA CGCGGTGAAA
GCCAACTCGA ACTTAGCCGT GCTAAACGTC TTGGCTCGTT TAGGCAGTGG TTTTGATATT
GTCTCGGGCG GAGAGTTAGC GCGGGTGATT GAAGCCGGTG GCGACCCGGC CAAAGTGGTA
TTTTCGGGCG TGGGTAAAAC CGTTGCCGAA ATGGAACAGG CACTTAACCT CGGTATTTAT
TGCTTTAATG TCGAATCGAG CGCCGAGCTT GAGCAGTTAA ATCAGGTCGC GGGCCGCTTA
GGTAAAATTG CTCCCGTGTC ATTGCGGGTG AATCCCGATG TCGATGCCGG TACGCATCCT
TATATTTCGA CGGGCCTTAA AGAGAACAAA TTTGGTATCG CTATGGATGA GGCCGAAGTT
GTATTCGCCC GTGCCCATGC GCTGCCACAT TTACAGGTAA AAGGGGTCGA TTGCCACATT
GGTTCACAAC TGACTGAGAT CCAGCCTTTC CTCGATGCGA TGGACAGAAT GTTAGCCCTT
ATCGACCGTT TGGCCGAGCA AGGCATTGTG ATTGAACACT TCGATGTGGG TGGTGGTTTA
GGGGTGACCT ATGATGATGA AACCCCGCCA CATCCTGATG TTTACGCCGC AGCCCTGCTC
GCGCGTTTAG GCGATCGCAA GCTCAAGTTA ATTTTCGAGC CGGGTCGTGC CATTGCCGCT
AACGCGGGTA TTTTCGTCAC GCAGGTGCTG TACCTTAAAG AAAACAGCGA TAAACGTTTT
GCGATTGTCG ACGGCGCGAT GAACGACTTA ATTCGTCCCG CACTCTATAG CGCTTGGCAA
AATATCATTC CGGTAAATCC AAGGGATGAA CAAGCGCAAG TATTTGATAT CGTAGGGCCT
GTGTGCGAAA CCGGTGACTT TTTAGGTAAA GACAGAGCAC TTGCGATTGC GGCAGGGGAT
TTATTGGTTG TGCGCTCGAG CGGTGCCTAC GGTTTTGCCA TGGCCTCTAA CTATAACACT
CGTCCCCGTG CGGCCGAGGT GATGGTCGAT GGTGACAAGG CTTATCTGGT GCGTGAGCGA
GAAAAATTAG CGCAGCTCTG GCAAGGTGAG CAACTCCTGC CGTAA
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| Protein sequence | MDHFLYQDNT LYAEGCRVND LAQQYGTPLY IYSRATLERH WHAFNNAVAD HPHLVCYAVK
ANSNLAVLNV LARLGSGFDI VSGGELARVI EAGGDPAKVV FSGVGKTVAE MEQALNLGIY
CFNVESSAEL EQLNQVAGRL GKIAPVSLRV NPDVDAGTHP YISTGLKENK FGIAMDEAEV
VFARAHALPH LQVKGVDCHI GSQLTEIQPF LDAMDRMLAL IDRLAEQGIV IEHFDVGGGL
GVTYDDETPP HPDVYAAALL ARLGDRKLKL IFEPGRAIAA NAGIFVTQVL YLKENSDKRF
AIVDGAMNDL IRPALYSAWQ NIIPVNPRDE QAQVFDIVGP VCETGDFLGK DRALAIAAGD
LLVVRSSGAY GFAMASNYNT RPRAAEVMVD GDKAYLVRER EKLAQLWQGE QLLP
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