| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0388 |
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| Symbol | hemC |
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| ID | 4251721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 434769 |
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| End bp | 435701 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638116947 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_732525 |
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| Protein GI | 113968732 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.571998 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAA ACCGCATACG TATCGCTACC CGCAAGAGCC CGCTGGCCAT GTGGCAAGCA
GAATTTGTTA AAGCAGAATT AGAACGCGTT CACCCAGGTA TCGTGGTGGA GCTATTGCCA
ATGAGCACTA AGGGCGATGT TATCTTAGAC ACCCCATTAG CTAAGGTTGG TGGTAAGGGC
CTGTTCGTAA AAGAACTCGA AGTCGCCATG CTGGAAGACC AAGCCGATAT CGCTGTGCAC
TCGATGAAGG ACGTGCCAGT GGATTTCCCC GAAGGCTTAG GACTGGAAGT GATTTGTGAG
CGCGAAGATC CGCGCGACGC CTTTGTGTCT AACCTTTATA AGTCAATCAG TGAGTTGCCA
CTTGGCGCCA CAGTCGGCAC CTCAAGCCTA CGTCGTCAGT GCCAGCTGCG CGCCTCACGT
CCAGACCTGA TTATCAAAGA TCTGCGTGGC AACGTCGGTA CTCGCCTCGC GAAACTCGAT
AACGGCGAAT ACGATGCGAT TATCCTGGCT GCTGCAGGTT TAATCCGCCT GAAATTGTCT
GAGCGTATCG CCAGCTTTAT CTCTGCGGAA GAATCCTTAC CCGCCAACGG TCAAGGTGCT
GTCGGTATCG AGTGCCGCAC TAACGATGAA CGCGTAAAAG CACTCCTAGC ACCTTTAGAA
CACTTAGAGA CTCGCTACCG CGTGATCGCC GAGCGCGCCA TGAATACTCG CCTCGAAGGC
GGCTGCCAAG TACCTATTGG TGCCTTTGCC GAAATCCACG GTGATGAGAT GACACTGCGC
GGCCTCGTAG GTAACCCAGA TGGTAGCGAA ATCATCGAAG GCGTGATTAC AGGTCCAAAG
ACCGAAGCAA CGAAACTCGG TGTGGCCCTG GCTGAAGAAC TACTCAGCAA AGGCGCCAAA
AGCATCCTCG ACGCTGTTTA CGCAAAAGCC TAA
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| Protein sequence | MSENRIRIAT RKSPLAMWQA EFVKAELERV HPGIVVELLP MSTKGDVILD TPLAKVGGKG
LFVKELEVAM LEDQADIAVH SMKDVPVDFP EGLGLEVICE REDPRDAFVS NLYKSISELP
LGATVGTSSL RRQCQLRASR PDLIIKDLRG NVGTRLAKLD NGEYDAIILA AAGLIRLKLS
ERIASFISAE ESLPANGQGA VGIECRTNDE RVKALLAPLE HLETRYRVIA ERAMNTRLEG
GCQVPIGAFA EIHGDEMTLR GLVGNPDGSE IIEGVITGPK TEATKLGVAL AEELLSKGAK
SILDAVYAKA
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