| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0383 |
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| Symbol | |
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| ID | 4251944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 412671 |
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| End bp | 414848 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638116942 |
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| Product | ABC transporter related |
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| Protein accession | YP_732520 |
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| Protein GI | 113968727 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTGTTA CAGCCTCAGA AAAAGTTGAG CAGTGGACTA TTTCCGCTTC ACAGCGGGTA
ATAGTCGACC CTCTACTTGA TTGTTTAGTG TTACTCACTG AACACTTTGG AAACCCATGC
TCAAGTGATT CACTTGCGGC AGGTCTGCCC TTGTCTGGGG CAGTTTTAAC ACCAGATTTA
GTACCACAAG CAGCCTCTCG AGCTGGATTA GCGGCCAAAT TGTCGCGTAA AGGGTTAAAC
GAAATCTCCC CGATACTGCT ACCGTGCATC TTGTTATTAA AAGACAAGAA AGCATGTATC
CTGCGTGAAC TCAAACTCGA GTCCGATAGA GCGGTTATTC AATTGCCAGA AACTGGCGGA
GAAGAAGTAC TCACAATAGA GTCACTCGAA ACCTTATATG TTGGTTACTT ATTCCTCGTT
AAACAAGAAT ACCGTGGCGA CATGGGATTC GATGTTTACT TGCACGACAA TAAAACTCAC
TGGCTAGTAC AAACCTTAAA AGACTCGGCA CCCATTTATC GAGATGCGCT AATCGCCTCG
GTGCTAGTCA ACATCTTTGC GTTAGTCTCT CCGCTGTTTA TCATGAATGT GTATGACAAG
GTTGTGCCTA ACTTAGCCTT TGAGTCCCTA TGGGTACTCG CCATCGGTGC ATCCATTGCC
TATTTGTTTG ACTTAGTCAT GCGGCAATTA CGTAGCTACT TAATTGATGT AGCAGGTAAA
AAGGTCGACA TTATAGTGTC GTCTCGGTTA TTTGCCAAAG CCATTGGTAT TCCGCTAGAG
AGACGATCCC CGAGTATTGG CGGCATGGCC AAGCAGCTTG GAGAATTCGA TAATATTCGG
GAAATTTTAA CCTCAGCGAC CATCACAACC TTGGTCGACT TACCGTTTGC ACTATTTTTC
ATCATCATTA TCTATATTGT GGCGGGAGAT TTAGCGGTCA TTCCCGTGGT CGGCGGCTTA
ATCATTATCG GTTTTACCCT TTATACCCAG CCTAAGCTAA AAGCCGCGAT TGAAGAAGGT
AATAAGTTTT CTAGCTTAAA ACACGGCCAT CTGATCGAAA GTCTTTCCGC ACTTGAATCG
ATAAAAGCCA ATGGTGCCGA AGGGATTGTT CAACGAAGCT GGCAACAGAT GATTGGTCAT
AGTGCTAACT GGCAATTAAG ATCGAAAAAG CTCTCCAACT CGGTCTCCAA TATGGCTAAC
TTCATCGTAC AATTTACGGT TGTATGCGTA GTGATTTTAG GGGTATACCG AGTTGCCGAT
AACGCCATTT CTATGGGGGG CATTATTGCG GCCGTGATGT TATCGAGCCG AGCCATAGCA
CCAATGGCGC AGCTAGCTGG TTTGATGACC CGCGCTAACC ATACCGCCAG TGCACTACGC
CAGCTCAACG AGCTAATGGT GCAAGAAGAC GAATTCGAGA ATAAAGGCCA CCTAGTCAGC
AAACAGCGTT TGATGGGTAA AATCAACGCC GATCATGTTG GTTTTAGCTA CCCAGGCTCA
GAAAAACCAG TGCTCTACCC TATGACTCTC ACCATAAATC CGGGTGAACG CATCGCTATT
ATTGGCCGTA ATGGGTCGGG TAAGAGCACC CTAGCCAAAC TCTTGGTTGG GTTATTTCAA
CCAACAACTG GGAGCCTGCG TTACGATGGT GTTGACTCGG CGCAAATCCA CCCAAGCGAT
CTACGTCGTA ACTTTGGCTA TCTGCCACAG GATGTCACCC TTTTCCACGG CACCATCAGA
GATAACATTC TTTTCGGTAC CCGCCAAGTA ACCGAGCACC AACTTATCCG TGCAGTCCAA
CTGTCTGGTG TTAGCCAGTT CACTCACTTG GAAGCGGAAG GTCTGGATCA ACAGGTTGGT
GAAGGTGGTA TGTCACTGAG CCGCGGTCAA AGACAAACCG TTGCCCTTGC CCGTGCGACA
CTAAATGATC CGCCAGTGCT GTTAATGGAT GAACCCACAG CCAGTTTGGA TGCCCGTGCC
GAGCAGCAAT TTATTCGCTC TATGCAAAAT GTCAGTAAGG ATAGAACCTT GCTGCTGATC
ACTCACAAAA TGCATTTATT GCAACTAGTT GACCGAATTA TCGTGCTAGA GCGCGGCCAT
GTGGTTGCCG ATGGTCCTAA GGCCGAAGTG TTAGAAAAAC TCAATTTTGG CCTTGTCACC
GGAGGCGCTA AAAAATGA
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| Protein sequence | MSVTASEKVE QWTISASQRV IVDPLLDCLV LLTEHFGNPC SSDSLAAGLP LSGAVLTPDL
VPQAASRAGL AAKLSRKGLN EISPILLPCI LLLKDKKACI LRELKLESDR AVIQLPETGG
EEVLTIESLE TLYVGYLFLV KQEYRGDMGF DVYLHDNKTH WLVQTLKDSA PIYRDALIAS
VLVNIFALVS PLFIMNVYDK VVPNLAFESL WVLAIGASIA YLFDLVMRQL RSYLIDVAGK
KVDIIVSSRL FAKAIGIPLE RRSPSIGGMA KQLGEFDNIR EILTSATITT LVDLPFALFF
IIIIYIVAGD LAVIPVVGGL IIIGFTLYTQ PKLKAAIEEG NKFSSLKHGH LIESLSALES
IKANGAEGIV QRSWQQMIGH SANWQLRSKK LSNSVSNMAN FIVQFTVVCV VILGVYRVAD
NAISMGGIIA AVMLSSRAIA PMAQLAGLMT RANHTASALR QLNELMVQED EFENKGHLVS
KQRLMGKINA DHVGFSYPGS EKPVLYPMTL TINPGERIAI IGRNGSGKST LAKLLVGLFQ
PTTGSLRYDG VDSAQIHPSD LRRNFGYLPQ DVTLFHGTIR DNILFGTRQV TEHQLIRAVQ
LSGVSQFTHL EAEGLDQQVG EGGMSLSRGQ RQTVALARAT LNDPPVLLMD EPTASLDARA
EQQFIRSMQN VSKDRTLLLI THKMHLLQLV DRIIVLERGH VVADGPKAEV LEKLNFGLVT
GGAKK
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