| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0376 |
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| Symbol | |
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| ID | 4251937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 401004 |
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| End bp | 403019 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638116931 |
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| Product | ATP-dependent DNA helicase Rep |
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| Protein accession | YP_732513 |
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| Protein GI | 113968720 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01074] ATP-dependent DNA helicase Rep |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.158989 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCA ATCCTGCCCA AAATGATGCT GTTCATTATG TTTCGGGTCC CTGCTTAGTG
TTAGCGGGCG CGGGCAGTGG CAAAACACGC GTAATTATCA ACAAGATTGC CTACCTAGTG
CAAAAGTGTG GCTACAATGC GCGCAATATT GCGGCGGTAA CCTTTACCAA CAAAGCGGCG
CGGGAGATGA AGGAGCGGGT TGCGCAGTCG ATGGGGCGCA AAGAGGCTAG AGGGCTGTGG
ATTTCGACCT TCCACACACT GGGGCTTGAG ATTGTAAAAC GTGAGCATAA AGTGCTGGGA
CTAAAGCCTG GGTTCTCGTT ATTCGATGAT CAAGACACGC TCGCGCTCCT TAAAGAGCTG
ACTCAAAAAG AATTACAGGA AGATAAAGAC TTACTCAAAG CTCTTGCGGG GGCAATTTCC
AACTGGAAAG GTGGGCTGAT TATTCCCGAC CAAGCGCGCA AGTTGGCAAA GGATGAACAA
CAGCAGTTGT TTGCCATGTT GTATCAGCGT TATGCCCAAC ATATGAAAGC CTACAACGCC
TTAGATTTTG ATGACTTAAT TCTGCTACCG ACCTTATTGC TAAGGCATCA CGAGGAAGTG
CGTACGCGCT GGCAAACCAA GATCCAATAC CTGCTGGTGG ACGAATATCA GGATACCAAC
ACTTCCCAGT ATGAAATGGT CAAATTACTG GTGGGCGAGC GCGCGCGTTT TACCGTAGTG
GGGGACGACG ACCAGTCCAT CTATTCATGG CGCGGGGCTA AACCGCAGAA CTTAGTGTTG
TTGGGCAAAG ATTTTCCCAA GCTTAAGCTG ATTAAACTTG AGCAGAATTA TCGTTCTAGC
CAACGTATTT TGCGGGCGGC TAACATCCTT ATCGCCAACA ATCCCCATGT GTACGATAAG
TCGTTATTTA GCGAGTTGGC TTATGGTGAG CCGATGCGGG TGCTGTTTGC CGCCAATGAA
GAGCAAGAAG CCGAGCGTGT CGTGGCCGAA ATCATTCGCC ACAAGTTTGT TGGTCGTACC
CAATTTGGTG ATTACGCGAT TCTGTATCGT GGGAACCACC AGTCTCGCCT GCTCGAACGG
GCGCTGATGA CTAACCGTAT CCCCTACAAG CTAAGTGGCG GCACCTCGTT TTTTGCCCGT
GCCGAGATTA AAGACATCAT GGGCTACCTC AAATTAGTGG TAAATCCCGA TGATGATAAC
GCCTTTTTGC GAGTGGTAAA TTTGCCTAAG CGCGGCATTG GTCCATCGAC CTTAGAGCGT
TTGGGTAACT TCTCCAACGA GAAACATATT TCCATGTTTG AGGCGATTTT TGACCCTGAG
CTGAATCATC ATTTACCGCC TAATGCCATG TCGGCCTTGT ATCAATTTGG CCGTTTTATT
GTCGATACCG GGGAGCACGC CGAGCGAGGC GAACCAGTTG AGGCGGTAAA ACAATTGATC
CGTAAGATTA ATTACGAAGA CTATTTATAC GAGACCAGTA CCAGCGCTAA GGCCGCCGAG
ATGCGGATGA AAAACATCTC CGAGCTCTAT CGCTGGGTGA CGGAAATGCT CTCGGGGGAT
GAGTTAGAAG AACCCATGAC CTTGCCTGAG GTGGTTAACC GCCTGACGCT TAGGGATATG
ATGGAGCGTA ACAGCGAGGA TGAAGGCGGC GATCAAGTGC AGTTAATGAC GCTGCATGCC
TCTAAAGGGT TGGAATTCCC CTTCGTGTTT ATGGTGGGGG TTGAGGAGCG CATTCTGCCG
CATCAAACCA GCATAGATGA AGATAACGTC GACGAGGAAC GTCGTTTGGC GTATGTGGGG
ATTACGCGTG CCCAGCGCGA GCTGTGGTTT ACTCTTTGCC GAGAGCGTCG CCAGTTTGGT
GAAACCATGC GCTGCGAGCC GAGCCGTTTT CTGCATGAGT TACCGCAGGA TGACCTTATT
TGGGAGAACC GTAAACCGCA GCAAACCGAA CAGGAGCGCA TGCAGACTGG CCGCAGCCAT
ATCTCAAATT TAAGGGATAT GTTTAAAAAG CAGTAA
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| Protein sequence | MKLNPAQNDA VHYVSGPCLV LAGAGSGKTR VIINKIAYLV QKCGYNARNI AAVTFTNKAA
REMKERVAQS MGRKEARGLW ISTFHTLGLE IVKREHKVLG LKPGFSLFDD QDTLALLKEL
TQKELQEDKD LLKALAGAIS NWKGGLIIPD QARKLAKDEQ QQLFAMLYQR YAQHMKAYNA
LDFDDLILLP TLLLRHHEEV RTRWQTKIQY LLVDEYQDTN TSQYEMVKLL VGERARFTVV
GDDDQSIYSW RGAKPQNLVL LGKDFPKLKL IKLEQNYRSS QRILRAANIL IANNPHVYDK
SLFSELAYGE PMRVLFAANE EQEAERVVAE IIRHKFVGRT QFGDYAILYR GNHQSRLLER
ALMTNRIPYK LSGGTSFFAR AEIKDIMGYL KLVVNPDDDN AFLRVVNLPK RGIGPSTLER
LGNFSNEKHI SMFEAIFDPE LNHHLPPNAM SALYQFGRFI VDTGEHAERG EPVEAVKQLI
RKINYEDYLY ETSTSAKAAE MRMKNISELY RWVTEMLSGD ELEEPMTLPE VVNRLTLRDM
MERNSEDEGG DQVQLMTLHA SKGLEFPFVF MVGVEERILP HQTSIDEDNV DEERRLAYVG
ITRAQRELWF TLCRERRQFG ETMRCEPSRF LHELPQDDLI WENRKPQQTE QERMQTGRSH
ISNLRDMFKK Q
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