Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0354 |
Symbol | |
ID | 4251548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 375764 |
End bp | 377854 |
Gene Length | 2091 bp |
Protein Length | 696 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638116909 |
Product | ATP-dependent DNA helicase RecG |
Protein accession | YP_732491 |
Protein GI | 113968698 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1200] RecG-like helicase |
TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCGCTA ACGACTTGCA GCAATTGGAT CTTGTTCCGA TCACCGACCT CAAAGGCGTC GCCAAAAGGG TGGCGGAAAA ACTCGCAAAG CTCGGCATCA CAACAGTACA AGATCTGCTG TTTCACTTAC CCCTGCGCTA CGAAGACCGC ACTCAGATTT ATCCTATTGC CGCCTTAATG CCGGGAAATT ACGGCACCAT TGAAGCCGAA ATCCAGTCGA CACAAATCAT TCAAGGCCGC AAACGCATGC TGGTGTGCAA TGTGCGGGAT AATACTGGCA GCATGAGCCT ACGCTTCTTT AACTTTTCGA TGGCGCAACG CAATGCGATG CAAAATGGCT TAATGATCCG CGCCTACGGT GAAATTCGCC GTGGCAATCA TCAGGCTGAA ATCGTCCATC CCGAGTACAA AATTGTGTAT CCCGGTGAAG ACATTCATTT AAGCGATACC CTCACGCCGA TTTATCCCAC TACGGAAGGA CTTAAACAGG CGAGTTGGAT TAAGCTCACC GAGCAAGCCC TCGAATTATT AGAAGACGGC GGTTTGACCG AGTTATTACC CACCAATTTA CAGCCCAACA GCATGAGCTT GAAACAGGCG CTGCAAACCC TACATCGCCC CCACGCTGGA ATATCACAAT TTGACTTAGA GCTCGGCCAG CATCCAGCGC AGCAACGGCT GGTGCAAGAA GAACTGCTCG CCCATAACCT CAGCATGCTC CGCCTCAGGC AGCGCAGCAA TCTCGACGCC GCCGTGACCA TGCTCGCCAG CGGCCAACTA TTGAATCCCT TTCTCGCCTC ATTGCCCTTT AAACCGACGG GCGCCCAGCA AAGAGTCGTC GCCGAGATTG GTAAAGACTT AGAGCAACCG CACCCCATGA TGCGTTTAGT CCAAGGTGAT GTGGGTTCGG GTAAAACCTT AGTCGCCGCC CTCGCCGCCT TGCAAGCCAT CGAAAATGGT TACCAAGTGG CCATGATGGC GCCTACCGAA TTACTCGCCG AGCAGCATGC GGCTAACTTT GCCGCCTGGT TTGAACCCTT GGGATTAAAA GTCGGATGGC TGGCGGGCAA ACTTAAAGGC AAGGCGCGGG CGCAATCCTT AGCCGATATT GAATCGGGCG ATGCACAAAT GGTGATAGGC ACCCATGCTA TCTTCCAGCA GCAGGTCACT TTCAACAAAC TGGCCTTGAT CATTATTGAT GAGCAGCACA GGTTCGGGGT TCACCAACGG ATGGGACTCA GGGAAAAAGG CATTAACCAA GGCTTTCATC CCCACCAGTT AATTATGACG GCCACGCCGA TCCCACGCAC CTTAGCCATG ACGGCCTACG CCGATTTGGA CACCTCGATT ATCGATGAGT TGCCGCCCGG CCGCACACCT GTGACCACGG TCGCCATCCC CGATTCGCGT CGCAATGAAG TGCTCGAGCG CGTCCGTAAC AGCGTAGTCA CGGATAAACG CCAAGCCTAT TGGGTCTGTA CCCTGATTGA AGAATCTGAA GTTCTCGAGT GCCAAGCGGC GGAAGATACC GCCGAAGAGT TACGCCAAGC GCTGCCGGAA CTGAGCATAG GTTTAGTCCA CGGCCGGATG AAAAGTGCTG AAAAGCAAAA AATTATGGCC GACTTCAAGG CGGGAACTAT CCATTTATTG GTGGCAACCA CAGTGATTGA AGTCGGTGTC GACGTACCCA ACTCCAGCTT AATGATTATC GAAAACCCAG AGCGGCTTGG CCTAGCACAG CTGCACCAAC TGCGGGGCCG CGTAGGGCGC GGTGCCGTGG CGAGCCATTG TGTGTTACTC TACAAGGCGC CATTGAGCCA AACCGCAAGC CAGCGGTTAA ATGTGCTCAG GCAAAGTAAT GATGGTTTTG TGATTGCACA GAAAGACTTA GAGATCCGTG GGCCGGGCGA AGTACTGGGC ACTAAGCAAA CGGGACTGGC CGAGCTGAAA ATCGCCGACC TTGTCCGCGA TCAGGCGCTT ATCCCACATA TCCAAAAACT GGCCAGCCAT GTGATGGCGC AGGCACCAGA GGCGGTCGAT GCCATTATTC ATCGTTGGCT TGGACACAGG CAACAATATG TTCAGGCCTA A
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Protein sequence | MSANDLQQLD LVPITDLKGV AKRVAEKLAK LGITTVQDLL FHLPLRYEDR TQIYPIAALM PGNYGTIEAE IQSTQIIQGR KRMLVCNVRD NTGSMSLRFF NFSMAQRNAM QNGLMIRAYG EIRRGNHQAE IVHPEYKIVY PGEDIHLSDT LTPIYPTTEG LKQASWIKLT EQALELLEDG GLTELLPTNL QPNSMSLKQA LQTLHRPHAG ISQFDLELGQ HPAQQRLVQE ELLAHNLSML RLRQRSNLDA AVTMLASGQL LNPFLASLPF KPTGAQQRVV AEIGKDLEQP HPMMRLVQGD VGSGKTLVAA LAALQAIENG YQVAMMAPTE LLAEQHAANF AAWFEPLGLK VGWLAGKLKG KARAQSLADI ESGDAQMVIG THAIFQQQVT FNKLALIIID EQHRFGVHQR MGLREKGINQ GFHPHQLIMT ATPIPRTLAM TAYADLDTSI IDELPPGRTP VTTVAIPDSR RNEVLERVRN SVVTDKRQAY WVCTLIEESE VLECQAAEDT AEELRQALPE LSIGLVHGRM KSAEKQKIMA DFKAGTIHLL VATTVIEVGV DVPNSSLMII ENPERLGLAQ LHQLRGRVGR GAVASHCVLL YKAPLSQTAS QRLNVLRQSN DGFVIAQKDL EIRGPGEVLG TKQTGLAELK IADLVRDQAL IPHIQKLASH VMAQAPEAVD AIIHRWLGHR QQYVQA
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