Gene Shewmr4_0351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0351 
Symbol 
ID4250862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp372754 
End bp373602 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content50% 
IMG OID638116906 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_732488 
Protein GI113968695 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAATC CTGTGCCACA CAATGCCGAA TTTAATGTCG CTTATACGCT GCCCGAAAAG 
CGCCGCGCGG GAATCAACTA TATTCCCCGT TGGCTCGGCG GCGTCAGTTG CTACATCGCC
TTTGGTCTCG GTGGACTGTT GAGTTCATTA ACTATCTTAC CTCTGCTGCG TTTTTGGCCG
GGCACGCCCG AGGCGCGGAT TATCCGCGTG CAAAAGGCCG TGCACACTAT GTTTAAAGGC
TTTGTGGCCA TGTTGACTTG GGCGGGAGTT ATCCGAGTCA GCACCCATAA TGCCGAGCTT
TTACACAATG CCAAGGGTGT GATAGTGATT GCCAATCACC CGAGTCTGGT CGATGTAGTG
GTATTAATCA GCTTGATGCC TAATGCGGGC TGTATCGTTA AGCAGGGGTT GTGGCGCAAT
CCCTTCTTAC GTGGCGTCGT CTCCTGCGCG GGATACATTC CCAATCGCGG CGCCGAGCTC
ATGCTCGAAG ATTGCCGCGA AGTGCTCGCC AGAGGCACTA ATTTAATTAT CTTCCCTGAA
GGTACGCGTA CTGTATTTGG CGCCAGCATT AACGAATTCG CCCGCGGTGC TGCCAATATT
GCCATTCGCA CCCAAGCCGA TATTTTACCT GTGGTTTTGC GCACCAATGT ACGTGGTTTG
ACAAAGGAAC AACCTTGGTA TGAGATCCCA AGGCAAACCA TGGGAATGGC CGTCGAAATC
GGTAACACAA TTTCTCACCA AGGCTACCAA GCACCTTTAG GTGAGCATGC GAAAATGGCT
CGGCAATTAA CCCGAGACCT TGAACAATAT TATCAACAAC AACTCGAAAA TAATTATGAC
TTTACATAA
 
Protein sequence
MPNPVPHNAE FNVAYTLPEK RRAGINYIPR WLGGVSCYIA FGLGGLLSSL TILPLLRFWP 
GTPEARIIRV QKAVHTMFKG FVAMLTWAGV IRVSTHNAEL LHNAKGVIVI ANHPSLVDVV
VLISLMPNAG CIVKQGLWRN PFLRGVVSCA GYIPNRGAEL MLEDCREVLA RGTNLIIFPE
GTRTVFGASI NEFARGAANI AIRTQADILP VVLRTNVRGL TKEQPWYEIP RQTMGMAVEI
GNTISHQGYQ APLGEHAKMA RQLTRDLEQY YQQQLENNYD FT