Gene Shewmr4_0346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0346 
Symbol 
ID4250857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp369979 
End bp370353 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content51% 
IMG OID638116901 
Productthioester dehydrase family protein 
Protein accessionYP_732483 
Protein GI113968690 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAGT CGAGTTTACC GCCGATCCTC GCATCAGAGA TCGGCCCAGA AAGTATTGAA 
CTGCGCCTCT TTGTCGCCGC CGATCTCGAA TATTTTAACG GCCATTTTCC CGAGCAAGCC
GTGCTCCCCG GCGTGACCCA ACTCGATTGG GCCGTGCGCT TAGGTTGCGA GCATTTTGGT
TACAACGCTG CGGTAGCTAA TTTAGAAGTG CTAAAGTTTC AACAACTTAT TTTGCCAGGG
CAGGAAGTCA CCTTAGCCAT TAGCCATAAT GCCGCCAAAG AGAAGTTAAC CTTTGCCTAC
AGCGATGGCG ACCACCGCTA TGCCTCTGGG CGTATCAGCT TTGCTAGTCA GCAAGATGAT
GGAGCATCCC TGTGA
 
Protein sequence
MIKSSLPPIL ASEIGPESIE LRLFVAADLE YFNGHFPEQA VLPGVTQLDW AVRLGCEHFG 
YNAAVANLEV LKFQQLILPG QEVTLAISHN AAKEKLTFAY SDGDHRYASG RISFASQQDD
GASL