| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0344 |
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| Symbol | |
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| ID | 4250855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 366588 |
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| End bp | 368153 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638116899 |
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| Product | histidine ammonia-lyase |
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| Protein accession | YP_732481 |
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| Protein GI | 113968688 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2986] Histidine ammonia-lyase |
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| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase
[TIGR01226] phenylalanine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCACG CAGTTACTCA CACGACAACC GCTGAGCCGC CAATCGAATT TGGCCGTCAG
TTACTCACAT TAGAGCAAGT CGTCGCCGTT GCTAAGGGTG CTAAAGTCAA ACTCTGTGAT
GATGCCGATT ACCAAGCGTA TATCCAAAAG GGCGCCCGCT TTATCGATAG CCTGCTGCAC
GAAGAAGGTG TGGTCTACGG CGTTACCACC GGCTATGGCG ACTCTTGCAC TGTCAACGTG
AGTCTCGACT TAGTCCATGA GTTGCCACTG CACTTATCCC GCTTCCATGG CTGTGGCCTA
GGCGAAATCT TAAGCGTGAT GCAGGCGCGC GCCGTGATGG CTTGCCGTTT AAACTCCCTC
GCCATTGGTA AATCCGGCGT GACCTATGAG CTGTTAAAGC GCATCGAAAC CTTGCTTAAT
CTCAATATAG TGCCAGTGAT CCCAGAGGAA GGTTCAGTCG GCGCCAGCGG TGACTTAACG
CCATTGTCTT ATCTCGCCGC CGTGCTAGTT GGCGAGCGCG AAGTGATTTA TAACGGCGAG
CGCAGAGCCA CCCAAGAGGT TTACCGCGAG CTGAACATCA CGCCCCATGT GCTGCGCCCC
AAGGAAGGTT TAGCCCTGAT GAATGGCACG GCGGTGATGA CGGCATTAGC CTGTTTAGCC
TTTGATCGTG CACAATATTT AGCGCGTTTA GCCAGCCGCA TTACCGCCAT GGCGTCGTTA
ACTCTCAAAG GTAACTCAAA CCATTTCGAC GATATTCTGT TTGCCGCCAA ACCCCATCCG
GGACAAAACC AAATCGCGAC TTGGATCAGG GAAGATTTGA ACCACCATGT TCACCCCCGC
AATTCAGATC GTCTGCAGGA CAGATATTCC ATCCGCTGCG CGCCGCACAT CATTGGCGTA
TTGCAGGATG CGCTGCCCTT TATGCGCCAA TTTATCGAGA CCGAAGTTAA CAGCGCCAAC
GATAACCCCA TAGTCGATGG TGAAGGCGAG CATATTCTCC ACGGCGGCCA TTTCTACGGC
GGACACATTG CCTTTGCGAT GGACTCCTTA AAAAACACTG TGGCCAACAT CGCCGATCTC
ATCGACCGCC AAATGGCATT AGTGATGGAC CCTAAGTTTA ACAACGGTTT GCCAGCTAAC
CTTTCGGGTT CAACTGGGCC ACGCCGCGCC ATCAACCATG GCTTTAAGGC AGTGCAAATC
GGCGTATCGG CTTGGACGGC TGAGGCGCTC AAGCACACTA TGCCTGCGAG CGTTTTCTCT
CGTTCAACCG AATGCCATAA CCAGGACAAA GTCAGCATGG GCACTATCGC CGCCCGTGAC
TGTATGCGTG TATTGCAGCT GACAGAACAA GTCGCCGCCG CAGCCCTGCT TGCCATGACC
CAAGGCATTG GTCTGCGTAT CAAACAGAAT GAGTTAGACG AAGCCTCGCT GACGCCATCG
CTGGCGACCA CGCTCGCCCA AGTGCGCGCC GATTTTGAGC CATTAGTCGA AGACAGACCG
CTCGAAGCCG TGCTGCGCCA AACCGTTTCG AAAATCCAAG CGGGCGAATG GGAAGTATGC
CGATGA
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| Protein sequence | MSHAVTHTTT AEPPIEFGRQ LLTLEQVVAV AKGAKVKLCD DADYQAYIQK GARFIDSLLH
EEGVVYGVTT GYGDSCTVNV SLDLVHELPL HLSRFHGCGL GEILSVMQAR AVMACRLNSL
AIGKSGVTYE LLKRIETLLN LNIVPVIPEE GSVGASGDLT PLSYLAAVLV GEREVIYNGE
RRATQEVYRE LNITPHVLRP KEGLALMNGT AVMTALACLA FDRAQYLARL ASRITAMASL
TLKGNSNHFD DILFAAKPHP GQNQIATWIR EDLNHHVHPR NSDRLQDRYS IRCAPHIIGV
LQDALPFMRQ FIETEVNSAN DNPIVDGEGE HILHGGHFYG GHIAFAMDSL KNTVANIADL
IDRQMALVMD PKFNNGLPAN LSGSTGPRRA INHGFKAVQI GVSAWTAEAL KHTMPASVFS
RSTECHNQDK VSMGTIAARD CMRVLQLTEQ VAAAALLAMT QGIGLRIKQN ELDEASLTPS
LATTLAQVRA DFEPLVEDRP LEAVLRQTVS KIQAGEWEVC R
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