Gene Shewmr4_0340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0340 
Symbol 
ID4250851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp361505 
End bp362812 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content53% 
IMG OID638116895 
Productmonooxygenase, FAD-binding 
Protein accessionYP_732477 
Protein GI113968684 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACAT CTACCGCTGC AAGCTCCGCA CAGTCCCACT CCCTTTCCGT CGATGTGGCC 
ATTATTGGCG CTGGCCCCTC GGGCTCGATT GCCGCTAGCC TATTGCATAA GCAAGGCAAA
CGGGTATTAG TGCTAGAAAA ACAACACTTT CCACGCTTTT CTATCGGCGA GAGTCTACTA
CCCTGCTGTA TGCAATTTAT TGAAGAAGCA GGCATGTTAG AGGCGCTGAA TGCGGCGGGA
TTCCAATATA AAAATGGCGC CGCCTTCCGA CGCGATGGGG TGTATACCAC CTTCGACTTT
ACCGACAAAT TTACCCCAGG GCCGGGCACA ACCTTCCAAG TGCAACGGGC AAACTTTGAC
AAATTGCTCG CCGATACCGC AGCAAGCTTT GGAGTGGATA TCCGTTACGG TGAAACCGTT
GAGGCAATCG ATTTAAGCGC CAACCCGCGC TTAAGCGTGC GTAACGAGCA AGGTGAGCAG
TACCAAGTTG AGGCGCAATA TGTGCTCGAT GCCAGCGGTT TTGGCCGAGT ATTGCCTCGA
CTACTCGACC TCGAAACGCC GTCATCACTG CCGACCCGCA GCGCTATCTT CACCCATGTG
GAAGATAACA TCAGCGATCC CGACTTTGAC CGTAATAAGA TTTTAATTAG TGTTCATCCA
CAGCATCAGG ATATTTGGTA CTGGTTAATT CCCTTCAGCA ACGGCCGTTG CTCGCTCGGC
GTCGTGGCTG AGCCGCAGTT ACTCGCGCGC CTCGAAGGCG ATTTAGAGCA GCAGCTACTG
ACTATAGTCA AAGAAGAACC CGGCCTGAAA GCATTGCTGG CCAATGCCAA GGTCGCTCAG
CCCTGTGCGA CACTCAAGGG TTACTCGGCC AACGTATCGC GCCTCGCCAC CGACAAGTTT
GCCCTGCTGG GCAACGCGGG CGAATTTCTC GATCCGGTAT TCTCATCGGG CGTGACTATC
GCCATGCAAT CGGCATCGAT GGCGGCGAAA TGCGTGCTTA AACAGCTAAA TGGCGACACG
GTAGATTGGC CCGCCGAGTA CTCGGCGCCG TTAATGCAAG GGGTGAACAC CTTCCGCACT
TATGTGCAGG CTTGGTACGA TGGTCGCTTC CAAGATGTGA TTTTTTACGA AAATCCGAAT
CCTAAAATCA AACAGATGAT CTGCTCGATT TTGGCGGGCT ATGCTTGGGA TGTGCAAAAT
CCCTTTGTAA AAGATTCCGA GCGACGCCTG AATCTGGTGG TCGAGCTATG TCGGCAAGAA
GCCGAACTCA GCGCCGAACC CGCTATTAGC GAATTAGCCG AGGTGTAA
 
Protein sequence
MSTSTAASSA QSHSLSVDVA IIGAGPSGSI AASLLHKQGK RVLVLEKQHF PRFSIGESLL 
PCCMQFIEEA GMLEALNAAG FQYKNGAAFR RDGVYTTFDF TDKFTPGPGT TFQVQRANFD
KLLADTAASF GVDIRYGETV EAIDLSANPR LSVRNEQGEQ YQVEAQYVLD ASGFGRVLPR
LLDLETPSSL PTRSAIFTHV EDNISDPDFD RNKILISVHP QHQDIWYWLI PFSNGRCSLG
VVAEPQLLAR LEGDLEQQLL TIVKEEPGLK ALLANAKVAQ PCATLKGYSA NVSRLATDKF
ALLGNAGEFL DPVFSSGVTI AMQSASMAAK CVLKQLNGDT VDWPAEYSAP LMQGVNTFRT
YVQAWYDGRF QDVIFYENPN PKIKQMICSI LAGYAWDVQN PFVKDSERRL NLVVELCRQE
AELSAEPAIS ELAEV