Gene Shewmr4_0337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0337 
Symbol 
ID4250848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp358895 
End bp359434 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content52% 
IMG OID638116892 
Productthioester dehydrase family protein 
Protein accessionYP_732474 
Protein GI113968681 
COG category[I] Lipid transport and metabolism 
COG ID[COG4706] Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGTT CTACTGACAC TGCAATGGCA CCCGCCGAGC CGATGTGGCT GCAACAATTA 
GCCGAGCAGA ATATTGCCGA TTTTATTCCG CACCGCGCAC CAATGATCTT GATTGATAAG
ATTATTCGCC ATCAGCAGGA TGCACTCGAA ACCGAAGTGC TGATCAGCCC TCAGAGTGCT
TATTTTGACG AGCAACGTCA GGCCGTTCCC AATTATGTGG GTATCGAATA CATGGCGCAG
AGCATCGCTG CCCTCGCCGG TGTTGAGGCC AAACTGCGCC ACGATAAAAT CCGCGTGGGT
TTTTTATTGG GATCGCGTAA ATTAGCCTTA CACACAGCGC AGTACGAGCT CAACCGCCGT
TATCGCACTC AGGTTAAACG CCTCTATCAA GAAGAGTCGG GACTGGCGGT ATTCGATTGC
CAGATTTATC TGTTGCCCGA GGTGGGAGCG GAGCAAACAC CACAACTCGT GGCCGAGGCC
AATGTGAACG TGTTCCAACC CCAGGACACC CAAGCGTATA TCGCCTCCAG TCAGGCTTAA
 
Protein sequence
MSSSTDTAMA PAEPMWLQQL AEQNIADFIP HRAPMILIDK IIRHQQDALE TEVLISPQSA 
YFDEQRQAVP NYVGIEYMAQ SIAALAGVEA KLRHDKIRVG FLLGSRKLAL HTAQYELNRR
YRTQVKRLYQ EESGLAVFDC QIYLLPEVGA EQTPQLVAEA NVNVFQPQDT QAYIASSQA