Gene Shewmr4_0324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0324 
Symbol 
ID4251483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp347962 
End bp348537 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content54% 
IMG OID638116879 
ProductXRE family transcriptional regulator 
Protein accessionYP_732461 
Protein GI113968668 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000421536 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCA TCAACAGCTA TCTTGCCGCG ACCCTAAAAC AACTGCGCAG CCAAAAGGGT 
TGGAGTTTAG ATAAAGCGGC ACTCGAGACA GGCGTAAGCA AGGCCATGAT AGGCCAGATT
GAGCGCGGTG AATCTAGCCC CACCATTGCC ACCCTGTGGA AAATCGCCAG CGGTTTTAAT
ACCTCACTCT CAACTTTTCT GGAGCCAACA CCCGAGAGCC AAGGCGCGGT CTTTCGTAAC
GCCGATGCAT TACGCCAAAA GCCTGCAACC GACGGCATGT TAGTGGCATC GCTATTTCCC
TTTGAGCCAC GCTTTGGTTT TGAGATGTTT GAACTCACTC TATTGCCGCA CTATGAGCGC
CTTTCCGAGC CCCATGAGGC GGGCGTGACC GAGCATGTGA TTGTACTGAG CGGCACCATG
GAAGTGTTAG TCGATGGCCA GTGGCAGCCA TTACAGCAGG GCGAGGCCGT GCGCTTTGCA
GCCGATAAAC CCCATGGTTA CCGCAACTTG AGCGATCAAC CCGTGGTGTT TTATGATCTT
ATCCATTACC ACAGGGAAGC ACCCGCCACC GAGTAA
 
Protein sequence
MQTINSYLAA TLKQLRSQKG WSLDKAALET GVSKAMIGQI ERGESSPTIA TLWKIASGFN 
TSLSTFLEPT PESQGAVFRN ADALRQKPAT DGMLVASLFP FEPRFGFEMF ELTLLPHYER
LSEPHEAGVT EHVIVLSGTM EVLVDGQWQP LQQGEAVRFA ADKPHGYRNL SDQPVVFYDL
IHYHREAPAT E