Gene Shewmr4_0319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0319 
Symbol 
ID4251478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp345636 
End bp346073 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content51% 
IMG OID638116874 
ProductD-tyrosyl-tRNA(Tyr) deacylase 
Protein accessionYP_732456 
Protein GI113968663 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1490] D-Tyr-tRNAtyr deacylase 
TIGRFAM ID[TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.442672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGCTT TAATTCAAAG AGTGAGCCGC GCCAGCGTGG TGGTGGACAA TCAAACCATA 
GGTGCAATCG ATAAGGGCTT GTTAGTTTTA CTTGGGGTTG AGCGGGAAGA TAACCGCGAG
AAGATGGAAA AATTAGCCAC TAAGGTGATG AGTTATCGAG TGTTTTCCGA TGAAAATGGC
AAGATGAATC TCAACTTAAC TCAGGCGGGT GGCTCACTTT TAGTAGTGTC GCAATTTACC
TTGGCCGCCG ACACTGGCCG TGGCCTGCGT CCGAGCTTTT CGGGGGCGGG TACACCTGAG
CAAGCGCTTG GCCTGTATGA AGAATTTGTC GCCTTTTGCC GTGCACAGGG GGTAACGACT
GAAACGGGAC AATTTGGCGC CGACATGAAA GTCGAGCTGG TCAACGATGG TCCAGTGACC
TTCAATTTGC AGGTGTAA
 
Protein sequence
MIALIQRVSR ASVVVDNQTI GAIDKGLLVL LGVEREDNRE KMEKLATKVM SYRVFSDENG 
KMNLNLTQAG GSLLVVSQFT LAADTGRGLR PSFSGAGTPE QALGLYEEFV AFCRAQGVTT
ETGQFGADMK VELVNDGPVT FNLQV