Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0317 |
Symbol | |
ID | 4251931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 344065 |
End bp | 345021 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638116872 |
Product | prolyl aminopeptidase |
Protein accession | YP_732454 |
Protein GI | 113968661 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | [TIGR01249] proline iminopeptidase, Neisseria-type subfamily |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.463031 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCACTG ACGCCCATCA GCTTGCCCCT TTTATCCGCC GTGATTGGCT GATGATGGGC AATGGGCAGC AGTTGCATCT CGCTCAATAT GGTAATCCGC GGGGGATTCC GCTGCTGTAT TTGCATGGTG GTCCAGGAGC GGGGGCTTCG GTCAGTGAAC TGAGTTTATT TAACCCCGAG CACTATTGGA TTTTACTTTT AGATCAACGT GGTGCGGGAC AATCACTGCC AGCTGGCGAG TTGGAACATA ACCATTTAAA TGGGCTTATC TGTGATATTG AGGCGATTCG TATTCACTTA GGCATAGAGC GTTGGTGCCT AGCGGGTGGC TCATTTGGCG CCACCTTAGC CTTAATTTAC AGTGGCTTAT TTCCCCATCG AGTGATTGCC CAAGTGCTGT GGGCAATGTT TATTCCCTCC AAGGCCGGCA TTGAATGGCT CTATGCACCC TCGGGCGCGG CGCAGTTATA TTCGCAGGCT TACCGTGAAT TTGCTGCACC TTCTATTGGA TTGGCGGATT TATTTACGCA CTATCAGCTA GGATTGAACG CCCAAGATGA AGTAATTCGT CATGAATTTG CCCGCCGTTG GATCCAATGG GAATTAATCT TAGCGGGCGT ACCAACTGGC CTACCTAAGC GGCTTACAAC GCCGTTATTG GCCTTAGCTC AAATCGAGCT GCACTATGCA AAAAATGATT ACTTCAATAT GTTCAGCGTA TTACAACGGG TGACATCTCA AGTCACAGCG CGTACCCTGC TATTACAAGG CACGCAGGAT GCTGTCTGTC CGGCACGCTT ATTAGCCGCA TTTTTGGCAA AAATCGACAA CCCTAGGATA CAAATTCATA CCATTGTCGA TGGTGGGCAT TCGCTGAATA GTGACATACT CTCACTTGCC GTCACACTCG AGATCCAAGC CATGTGGACT TGGATAAAGC GACAGGAGCT AGCATGA
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Protein sequence | MITDAHQLAP FIRRDWLMMG NGQQLHLAQY GNPRGIPLLY LHGGPGAGAS VSELSLFNPE HYWILLLDQR GAGQSLPAGE LEHNHLNGLI CDIEAIRIHL GIERWCLAGG SFGATLALIY SGLFPHRVIA QVLWAMFIPS KAGIEWLYAP SGAAQLYSQA YREFAAPSIG LADLFTHYQL GLNAQDEVIR HEFARRWIQW ELILAGVPTG LPKRLTTPLL ALAQIELHYA KNDYFNMFSV LQRVTSQVTA RTLLLQGTQD AVCPARLLAA FLAKIDNPRI QIHTIVDGGH SLNSDILSLA VTLEIQAMWT WIKRQELA
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