Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0316 |
Symbol | rbn |
ID | 4251930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 343006 |
End bp | 344019 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638116871 |
Product | ribonuclease BN |
Protein accession | YP_732453 |
Protein GI | 113968660 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.293845 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTAAGA AGATAGAACT GGCACAAATT CAAGTCTTAT TCCTCGGGAT CTGGCGCTTC CTGCTGCATT TACGCCAGCG TTTAGTGGAA GATCAAATCA ATATCCGCGC GGGCCACCTA GCCTATGTCA CCCTGTTATC CCTTGTGCCT ATGGTGGCTG TGACTATGTC TATGCTGTCG GCTTTCCCTG TGTTTAAGGG GATCCGTGGC CAAATCGAAG CCTTCGTGTA CGAGAATTTT CTGCCCGCGG CGGGCGATAC GGTACAAGTC TATATTAATG AATTTGTTGG TAATGCTTCT AAGGGCACGG CTGTAGGGAT CGCGGCTCTT GTCGTGGTGG CGATTATGCT GATCTCCGCC ATCGATAAAT CGCTGAATAA TATTTGGCGC ACTAAGGAAA AGCGTTCCGT GGTGGTGGCA TTTTCCATGT ATTGGATGGT GATTACCTTA GGCCCTGTGC TGGTGGGCGC GAGCTTAGTG GCGACTTCCT ACGTGGTGTC ATTAAAACTG TTTGAGGGCG ACGCATTATC TGGGGTGATG CCACTGTTTA TCGAACGTTT ACCACTGTTT TTTTCTGTCG CCGCATTCTT ACTTTTATAT ATGGTGGTGC CGAATCAAAA GGTGAAGTTT TGGCATGCGC TATTAGGCGC GGTAGTGGCG GCGTTACTGT TCGAGTTGGG GAAAAAAGGT TTTGCCCTGT ATGTGACTAA ATTCCCAAGT TATGAAGCCA TTTACGGCGC TCTGGCGACC ATTCCTATTC TGTTCGTTTG GGTATATTTA TCTTGGATGA TAGTGCTGCT GGGCGCCGAA ATTACCGCGG CCATGCCCGA GTATTTGGAC TATGAGTCCA GCAGCGATAT CAACGAAACT AACCTCGATG GTCAACCTTT AGCGGCGCAG GATACACCCG CCGCGCAGCC AGAAACCACA TCCGGCCAAT CAACCCAAGT GCTTGAGACG ACAGGCGAAC TCGCTGCAAC CGCGCCGCAA TCGACTACAC TGGATAAGCC GTAG
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Protein sequence | MTKKIELAQI QVLFLGIWRF LLHLRQRLVE DQINIRAGHL AYVTLLSLVP MVAVTMSMLS AFPVFKGIRG QIEAFVYENF LPAAGDTVQV YINEFVGNAS KGTAVGIAAL VVVAIMLISA IDKSLNNIWR TKEKRSVVVA FSMYWMVITL GPVLVGASLV ATSYVVSLKL FEGDALSGVM PLFIERLPLF FSVAAFLLLY MVVPNQKVKF WHALLGAVVA ALLFELGKKG FALYVTKFPS YEAIYGALAT IPILFVWVYL SWMIVLLGAE ITAAMPEYLD YESSSDINET NLDGQPLAAQ DTPAAQPETT SGQSTQVLET TGELAATAPQ STTLDKP
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