| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0311 |
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| Symbol | |
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| ID | 4251925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 336349 |
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| End bp | 338535 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638116866 |
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| Product | catalase/peroxidase HPI |
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| Protein accession | YP_732448 |
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| Protein GI | 113968655 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0376] Catalase (peroxidase I) |
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| TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAGA CTCAAAGCTC CCAAGGTAAA TGCCCCGTGA TGCATGGGGC AAATTCAGCG
GTCGCCAGCA ACAATATGGA TTGGTGGCCT AAGGCACTTA ACCTCGATAT ATTGCACCAG
CACGATAAGA AGACGGATCC TATGGATCCT AAGTTTAACT ATCGCGAAGC CTTCAACAGC
TTAGATCTCG CCGCTGTGAA GCGCGACCTC AATGCCTTAA TGACCGACAG CCAAGATTGG
TGGCCCGCCG ACTGGGGACA CTATGGCGGT CTGATGATCC GTATGGCATG GCACTCGGCC
GGGACCTATA GAGTCGCCGA TGGCCGTGGC GGCGCGGGAA CGGGCAATCA ACGCTTTGCC
CCACTCAATA GCTGGCCCGA TAACGCCAAC TTAGACAAGG CGCGCCGTTT ACTCTGGCCG
ATTAAGAAAA AATACGGCAA CAAACTCTCA TGGGCGGATT TGATGATCCT CGCGGGCAAT
GTGGCCTACG AGTCTATGGG CTTAAAAACC TATGGCTTTG CTGGTGGTCG AGAGGATATT
TGGCACCCAG AGAAGGACAT TTATTGGGGC TCTGAAAAAC AATGGTTAGC GCCGACGGAA
AATCCCAACA GCCGTTACTC GGGCGAGCGT GACCTTGAAA ACCCCTTGGC CGCGGTGATG
ATGGGGCTGA TCTATGTGAA TCCAGAAGGG GTTGATGGCA AACCCGATCC CCTGCGAACC
GCCCAAGATG TGCGTGTCAC CTTTGCGCGA ATGGCGATGA ATGATGAAGA GACAGTGGCT
CTAACCGCAG GAGGCCACAC CGTGGGTAAG TGCCACGGTA ATGGCAAGGC GCAGGATCTT
GGCCCCGAGC CTGAGGGCGA AGATCTTGAG GCCCAAGGTT TGGGCTGGCT CAACAAAAAA
GGCCCAGGCA TTGGCGCAAA TGCCGTGACC AGTGGCCTCG AAGGTGCTTG GACGACTTAT
CCCACTCAAT GGGATAACGG TTATTTTCAC CTACTGTTAA ATTACGATTG GGAATTGAAA
AAAAGCCCAG CGGGCGCCTC GCAGTGGGAA CCTATTAATA TCAAAGAGGA AGATAAAGTC
GTCTCAGTGG GCGATCCCAA TCGCAAGTTT AATCCCATCA TGACGGATGC GGATATGGCG
ATGAAGATGG ACCCCGAGTA TCGCAAAATC TCCGAGAAGT TTTATCAAGA CCCCGCCTAT
TTCTCCGAGG TTTTTGCCCG CGCTTGGTTT AAGTTAACCC ATCGCGATCT GGGTCCGAAG
AGCCGCTACT TGGGGCCAGA AGTGCCGAAT GAGGATTTGC TTTGGCAAGA CCCGATCCCA
AGCGTCGATT ATCGCTTAGA TGCCAGTGAG ATTGTCGACC TGAAGGCGAA ATTATTAGCC
TCGGGACTCA GCGTATCCGA GTTAGTGGCA ACGGCGTGGG ACAGTGCCCG CACCTTCCGT
GGCTCGGATT TCCGTGGTGG CGCCAATGGC GCGCGGATCC GCTTAGCACC GCAAAAGGAT
TGGCAGGCTA ACGAACCCGA GCGGCTGCAA AAGGTGCTTA AAGTATTGAC CGAGTTGCAG
GCAAGCCTAA GCAAAAAAGT CAGCATCGCC GACTTAATCG TGTTGGGCGG CGCTGCTGCG
ATTGAAAAGG CCGCCCACGA GGCGGGAGTG AAGGTGACAG TGCCCTTTAT CCCCGGCCGT
GGCGATGCGA CGCAGGAAAT GACCGATGTG GAATCTTTTG CCGTGCTTGA GCCCTTGCAC
GATGCGTATC GTAACTGGCA GAAAAAGGAT TATGTGGTTC AGCCCGAGGA GATGATGCTC
GATCGTACTC AATTGATGGG GTTAACCGCC CATGAGATGA CAGTGCTGGT TGGGGGAATG
CGGGTGTTAG GCACTAACTA TGGCGGCACG CGTCATGGTG TGTTTACCGA CAAAGTAGGT
GTGTTAACTA ATGATTTCTT TGTGAATCTG ACCGACATGG CCTACAACTG GAAGCCTGCG
GGCAGCAATC TTTATCAGAT AGTCGAGCGC AAAACTGGCG CAGTGAAGTG GACCGCTAGC
CGTGTCGATC TGGTGTTTGG TTCTAACTCT ATTTTGCGTG CCTATGCCGA GATGTATGCG
CAGGATGATG CCAAAGAGAA GTTTGTGCAT GATTTTGTGG CCGCTTGGAC TAAGGTGATG
AATGCCGATA GGTTCGATTT GGCTTAG
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| Protein sequence | MDKTQSSQGK CPVMHGANSA VASNNMDWWP KALNLDILHQ HDKKTDPMDP KFNYREAFNS
LDLAAVKRDL NALMTDSQDW WPADWGHYGG LMIRMAWHSA GTYRVADGRG GAGTGNQRFA
PLNSWPDNAN LDKARRLLWP IKKKYGNKLS WADLMILAGN VAYESMGLKT YGFAGGREDI
WHPEKDIYWG SEKQWLAPTE NPNSRYSGER DLENPLAAVM MGLIYVNPEG VDGKPDPLRT
AQDVRVTFAR MAMNDEETVA LTAGGHTVGK CHGNGKAQDL GPEPEGEDLE AQGLGWLNKK
GPGIGANAVT SGLEGAWTTY PTQWDNGYFH LLLNYDWELK KSPAGASQWE PINIKEEDKV
VSVGDPNRKF NPIMTDADMA MKMDPEYRKI SEKFYQDPAY FSEVFARAWF KLTHRDLGPK
SRYLGPEVPN EDLLWQDPIP SVDYRLDASE IVDLKAKLLA SGLSVSELVA TAWDSARTFR
GSDFRGGANG ARIRLAPQKD WQANEPERLQ KVLKVLTELQ ASLSKKVSIA DLIVLGGAAA
IEKAAHEAGV KVTVPFIPGR GDATQEMTDV ESFAVLEPLH DAYRNWQKKD YVVQPEEMML
DRTQLMGLTA HEMTVLVGGM RVLGTNYGGT RHGVFTDKVG VLTNDFFVNL TDMAYNWKPA
GSNLYQIVER KTGAVKWTAS RVDLVFGSNS ILRAYAEMYA QDDAKEKFVH DFVAAWTKVM
NADRFDLA
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