Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0310 |
Symbol | |
ID | 4251924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 334919 |
End bp | 335995 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638116865 |
Product | alcohol dehydrogenase |
Protein accession | YP_732447 |
Protein GI | 113968654 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTGA TGACTATGCC AACGATGAAT GCCATCGTTA TGCAGGATGG TGAAGTCAGC CTGCAACAGG TCGATTTACC CAAGCCACAG GCGGGCCAAG TGTTGGTGCG TAGCCTTGCT TGTGGTATTT GTGGCTCGGA TATTCATATC ACGCGACACT ACAACGAAGT ATTTGATTTT TATCGTCAGC TTGGGGTGAT GCCCGAAGGC GTCGATAAGC ATGCCGCTGT GATGCTCGGC CATGAGTTTT GTGCCGAAAT CGTCGAGTTT GGCCCACAAA CTCAGCAAGC CTTGGCGCTA GGAACACGGG TGACCTCAGT TCCGATTCTG ATGAGCCAAA ATGGTGCTGG GGTGGGCGTT ACCCCTGGCG TGAATGGTGC TTATTCTGAG TACTTTATTC TCGATGAGGC CTTATTAATG CCTGTACCTG AGCATTTGCC ATCGGAGGCC GTGGCGCTCA CCGAACCATT AGCCGTAGGA TTACATGCGG TGAATCGGGG TGATGTGCAG GCCGAAGATG TTGCGCTGGT GGTTGGTTGC GGTCCCATTG GTCTTGCGGT GATCTCCGCT CTGCACTTGC GCGGCGTAGC TAAGATTGTG GCTGCGGATT TACAGAGTGA TAAGTTGCAA TTAGCCCGAG AATTTGGTGC CACCCATACG GTGAATCCTA GCGAGCAGGA TGAAGTCGCC TTCGCCGCCA AGCTTGCTGC GGGTCAGCGC TTGGTGATTT TCGAATGTGT GGGTATCCAT AAGCTTATCG AAGGCTTTGT GCAGCGAGCT CCCGCCAAAG CGACCATAGT GGTCACGGGC ATCCACACCG CAAACTCCAA TATTAATTAT GCCTATGCCA CGGTCAAAGA ATTGGATATG TGCTTCTCCT ACTACTATCA GCCGGCGGAA TTTGCGGCCT GTTTAGAGGA GCTGGCGCAG GGGACGATTC CTTGGCGTAA GCTGCTCACG GGTAAGGTGG GGATGGATGG TGTATCGGGT GCGTTCAAGC AATTGATGAA ACCGAACCCA CATATCAAAG TCGTTATCGA ACCTTGGCGT AATGGTGAGC TAGAGATGCT CGACTAA
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Protein sequence | MSLMTMPTMN AIVMQDGEVS LQQVDLPKPQ AGQVLVRSLA CGICGSDIHI TRHYNEVFDF YRQLGVMPEG VDKHAAVMLG HEFCAEIVEF GPQTQQALAL GTRVTSVPIL MSQNGAGVGV TPGVNGAYSE YFILDEALLM PVPEHLPSEA VALTEPLAVG LHAVNRGDVQ AEDVALVVGC GPIGLAVISA LHLRGVAKIV AADLQSDKLQ LAREFGATHT VNPSEQDEVA FAAKLAAGQR LVIFECVGIH KLIEGFVQRA PAKATIVVTG IHTANSNINY AYATVKELDM CFSYYYQPAE FAACLEELAQ GTIPWRKLLT GKVGMDGVSG AFKQLMKPNP HIKVVIEPWR NGELEMLD
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