| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0299 |
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| Symbol | |
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| ID | 4250845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 319808 |
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| End bp | 321328 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638116854 |
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| Product | flavocytochrome c |
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| Protein accession | YP_732436 |
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| Protein GI | 113968643 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0588345 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGATA GAAGAAGTTT TTTAAAGCTA GGTGCTGGTG CTGCGGTAGG CGGTATCGCA
GCGGCATTGC CAAGTGCAGC ATTAGCCACT GAATGCGCCT CAAACATTAA ATGGGATGAA
ACTCGTGATG TTATTGTCGT GGGGTCAGGT TTTGCGGGGC TGTCATCCGC ACTAAATGCT
AAGCGACAAG GTCTAGGCTC GATACTGGTA TTAGAAAAAA TGCAGGTGAT CGGTGGCAAC
TCAGCGATCA ACGGGGGCTG GTTAGCTATC CCTAAAAACC CAATCCAATT AGCTCAAGGC
ATCAACGATG ACTCACCCGA AGAGCTAGTG AAGGATCAAA TTATCTCTGG CCGCGGTATG
CAAAATACCG ACATGCTACG ACAAATCGCT AATCGTGCCC TGGATGCTTA TCAGCTGTGT
ATTGATACTG GGGTTAAATT CCGTGAGGGC TTTAACCAAC AAGTGGGCGG CCACAATAAA
GCGCGAGCTA TCCGTACTCT GCATGGCGTC GGTGGCGATA TCACCACAAA ACTCTATGAA
GCGGGTAAAA AAGAAGGCGT TGAGTACCGT CTACAACATT ATGTTGAAGA CTTCATCATG
GATGGCCAAG AGATTGTTGG CTTGAAAGTA CGTCAAAATT ATCGTTTCCC GGATCTCAAA
ACCGGTAAAA CAATCTACAT CAAAGCCAAT AGGGCCGTTA TCCTTGCCCA CGGTGGTTTC
TCACGTAACT TAGCACTACG TGAACTGGTC GACCCTGCAT TAGATAAAAC CTTAGATTGT
ACCAATGCCC TAGGCGCAAC GGGCGAAGTC ACACTAACGG CTATGGCCCA CGGTGCTTTT
CCGGTTCATA TGAGCTTTAT TCAAACAGGT CACTGGGGCT CGCCAGATGA AGGCGGCTTT
GGCTGGTCAA ATGCTCTGCT CTCGATTGGT TTCCATAAAG GGATTTCAGT CAATGTGTTA
GATGGTAAGC GTTTTATGAA TGAACGCGCC GATAGAAAAA CCTGCTCCGA CGCCATTATG
AAAAATCGTA ACCCTGATGG CTCACCCGCC TATCCTGTGG TGTTTTTTAA CCATGACGAT
CATGTTGGTG CAGAAGAAGT GACCCGCGCA GTACGTGACC AAATCGCTTG GAAAGTCGAT
AGCCTTGAGC AATTAGCTAA GCAATTCAAT ATCCCACTTG CGCAGCTCAA ACAAACTGTA
GACGAGTACA ACAAGCAAGT GCCACTGCGC ATAGATCCCT TGTTTGGACG CATGATGGAT
ACGGCAGTTG AGCTTAAAGC GCCGTTTATT GTGTCACGTA TTTGGCCAAA AGTGCACTAC
TGCATGGGCG GTTTAAAAAC CGATTTAGGC GCGAGAGTGC TGCATAGTCA AACCCTAGCT
CCGATGAAAA ATCTCTATGC CGTTGGCGAA GCAACTGGCG GCACTCACGG TGGAACCCGT
TTAAGTTCAA CAGCTTGTCT GGAGTGTTTA ACGATGGGAA TTATCGTTGC TGAAACCATC
AAATCTGACA TGCAGGCCTA A
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| Protein sequence | MHDRRSFLKL GAGAAVGGIA AALPSAALAT ECASNIKWDE TRDVIVVGSG FAGLSSALNA
KRQGLGSILV LEKMQVIGGN SAINGGWLAI PKNPIQLAQG INDDSPEELV KDQIISGRGM
QNTDMLRQIA NRALDAYQLC IDTGVKFREG FNQQVGGHNK ARAIRTLHGV GGDITTKLYE
AGKKEGVEYR LQHYVEDFIM DGQEIVGLKV RQNYRFPDLK TGKTIYIKAN RAVILAHGGF
SRNLALRELV DPALDKTLDC TNALGATGEV TLTAMAHGAF PVHMSFIQTG HWGSPDEGGF
GWSNALLSIG FHKGISVNVL DGKRFMNERA DRKTCSDAIM KNRNPDGSPA YPVVFFNHDD
HVGAEEVTRA VRDQIAWKVD SLEQLAKQFN IPLAQLKQTV DEYNKQVPLR IDPLFGRMMD
TAVELKAPFI VSRIWPKVHY CMGGLKTDLG ARVLHSQTLA PMKNLYAVGE ATGGTHGGTR
LSSTACLECL TMGIIVAETI KSDMQA
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