| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0295 |
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| Symbol | |
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| ID | 4250841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 314761 |
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| End bp | 315885 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638116850 |
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| Product | aminotransferase, class V |
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| Protein accession | YP_732432 |
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| Protein GI | 113968639 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00361608 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGCTAA ATGTAAAACA AGACTTTTGC CTCGCAGGCC CAGGCTATCT GCTCAACCAT
TCCGTGGGGC GGCCACTTAA ATCGACCGAG CAGGCGTTTA AGCAGGCATT TTTTGCGCCT
TGGCAGGAGT CTGGCCGCGA GCCTTGGGGC CAATGGTTGG GCGTCATCGA TAACTTTACC
GCGGCGCTGG CGAGCCTTTT TAATGGTCAG CCGCAGGACT TTTGCCCGCA GGTGAATCTA
TCGAGCGCCT TGACCAAAAT TGTGATATCC CTCGATAGAT TAACGCGAGA TGGCGGCGCC
GTGGTGCTGA TGAGCGAGAT TGATTTTCCC AGCATGGGGT TTGCCCTGAA AAAGGCATTG
CCCGCAAGCT GTGAACTGCG CTTTATTCCC AAGGGTTTAG ATGTCACCGA CCCCAATGTG
TGGGACGCGC ATATTTGTGC CGATGTCGAT TTAGTCTTTG TCAGCCATGC CTATTCTAAT
ACTGGTCAGC AGGCGCCATT GGCGCAGATC ATTCCCCTTG CCCGTGAGCG TGGCTGCTTG
AGTCTCGTGG ATGTGGCGCA ATCGGCTGGG ATTTTACCGC TGGATTTAGC CAAGCTACAG
CCGGACTTTA TGATTGGTTC GAGTGTGAAA TGGTTATGCT CAGGCCCAGG GGCTGCGTAT
CTGTGGGTCA ATCCGGCTAT TTTGCCCCAG TGTCAGCCGC AGGATGTGGG TTGGTTTAGC
CATGAAAATC CCTTCGAGTT TGATATCCAT GATTTCCGCT ATCACCCAAC TGCGCTGCGG
TTTTGGGGCG GTACACCTTC TATCGCGCCC TATGCGATTG CCGCTCACAG CATTGAATAT
TTTGCCAATA TTGGTTCACA GGTGATGCGT GAACATAACT TGCAGTTGAT GGATACGGTC
GTCCAAACAT TGGAATGTGA TTTGGTCTCG CCACGGGAAG TCGATAAGCG CAGTGGCACC
TTGATCCTGC AATTTGGCGA GCGACAAGCA CCCATCATGG CGGCGTTGGC GGAGGCGAAT
ATCAGTGTCG ATGCCCGCAG TTTAGGAATG CGCGTATCGC CGCATATCTA TAACGATGAG
GCCGATATCG CGAAATTGCT GGAGGTGATA AAAGCCCATC GTTAA
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| Protein sequence | MLLNVKQDFC LAGPGYLLNH SVGRPLKSTE QAFKQAFFAP WQESGREPWG QWLGVIDNFT
AALASLFNGQ PQDFCPQVNL SSALTKIVIS LDRLTRDGGA VVLMSEIDFP SMGFALKKAL
PASCELRFIP KGLDVTDPNV WDAHICADVD LVFVSHAYSN TGQQAPLAQI IPLARERGCL
SLVDVAQSAG ILPLDLAKLQ PDFMIGSSVK WLCSGPGAAY LWVNPAILPQ CQPQDVGWFS
HENPFEFDIH DFRYHPTALR FWGGTPSIAP YAIAAHSIEY FANIGSQVMR EHNLQLMDTV
VQTLECDLVS PREVDKRSGT LILQFGERQA PIMAALAEAN ISVDARSLGM RVSPHIYNDE
ADIAKLLEVI KAHR
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