| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0293 |
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| Symbol | |
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| ID | 4250839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 311951 |
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| End bp | 313294 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638116848 |
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| Product | anaerobic C4-dicarboxylate transporter |
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| Protein accession | YP_732430 |
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| Protein GI | 113968637 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2704] Anaerobic C4-dicarboxylate transporter |
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| TIGRFAM ID | [TIGR00770] anaerobic c4-dicarboxylate membrane transporter family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000600202 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTTTAA TGGAGTTTAT TGTCGTACTC GGCTGTTTAC TGCTCGGTAC CCGTTATGGC
GGTATGGGGC TAGGACTGAT AAGTGGTATT GGCTTATTTT TACTGACATT TGTGTTTGGT
CTCGCGCCCG GACAACCGCC CGTACAGGTG ATGCTCACCA TTCTTGCGGT GATAGGCTGT
GCCTCGGTGT TACAAACCGC AGGTGGTTTA AATGTGATGA TGCAGTTTGC CGAGCGTTTA
CTGCGCCGCC ATCCACAGTA CATCACCATT TTGGCGCCGC TCACCACCTG GACTTTAACC
TTTTTATGCG GAACCGGCCA TGTGGTTTAC ACCATGTTCC CGATCATCTC CGATATCGCC
CTGAAGAAAA ACATTCGCCC AGAACGCCCG ATGGCGGTGG CATCAGTCGC CTCGCAAATG
GCGATTTGCG CTTCTCCGGT ATCGGTCGCC GTGGTTTCTA TGGTATCGAT TTTGGCGGCG
CAGCATGGTG TCGGCCATGC CTACAGCATG CTGGAAATTT TAATGGTGTC TGTACCAGCT
TCTCTTTGCG GCGTATTAGT GGCGGCACTC TGGAGCCTGC GTCGTGGTAA AGATTTAGAT
AAGGACGAAG AGTTTCAGGC GCGAATTAAA GATCCCGAAC AAAGGGCGTT TATCTACGAC
AAGAGCGAGA CTCTGCTGGA TCAAACCTTT CCTAAGGAAG CCTATTGGGC GACGGGGATT
TTCTTCACCG CTATCGCCGC CGTGGTGTTA CTTGGCTCCT TTAGCGAACT GCGCCCAGTG
TTTGAGGTGA AGGGCAAACT GGCGCCGCTA TCGATGAACT TAGTGATCCA GATGATGATG
TTGATCGCTG GCGCTTTTAT CTTAATGAGC TGCAAGGTCA AACCCACAGA AATTGCCAAC
GGCCCAGTGT TTAAGGCCGG CATGGTAGCG ATTTTCTCAG TATTTGGCGT GGCTTGGATG
AGTGATACTT ACTTTATCAG CCATATGGAT GTGCTGAAGG AAAACCTCTC CCATGTGGTG
CAAAACCAAC CTTGGACCTA TGCCTTAGTG CTGTTTTTAA TCTCAAAACT GGTCAACAGC
CAAGCTGCGG CGCTCACGGC TATCGCGCCC ATGGGCTTGG CCTTAGGCGT CGATCCTAAG
TTGTTGATTG CCTTTTTACC CGCGAGCTAT GGTTACTTTG TGCTACCTAC TTATCCAAGC
GATTTGGCCT GTATCGGCTT CGACCGAACA GGGACCACCA AAATTGGTAA GTTCATCATT
AACCACAGCT TTATCATCCC GGGATTGATA GGCGTGGGCA CAGCATCGAC CGTCGGCTAT
CTGCTGGCGA CCACCTTACT GTAA
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| Protein sequence | MILMEFIVVL GCLLLGTRYG GMGLGLISGI GLFLLTFVFG LAPGQPPVQV MLTILAVIGC
ASVLQTAGGL NVMMQFAERL LRRHPQYITI LAPLTTWTLT FLCGTGHVVY TMFPIISDIA
LKKNIRPERP MAVASVASQM AICASPVSVA VVSMVSILAA QHGVGHAYSM LEILMVSVPA
SLCGVLVAAL WSLRRGKDLD KDEEFQARIK DPEQRAFIYD KSETLLDQTF PKEAYWATGI
FFTAIAAVVL LGSFSELRPV FEVKGKLAPL SMNLVIQMMM LIAGAFILMS CKVKPTEIAN
GPVFKAGMVA IFSVFGVAWM SDTYFISHMD VLKENLSHVV QNQPWTYALV LFLISKLVNS
QAAALTAIAP MGLALGVDPK LLIAFLPASY GYFVLPTYPS DLACIGFDRT GTTKIGKFII
NHSFIIPGLI GVGTASTVGY LLATTLL
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