| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0284 |
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| Symbol | |
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| ID | 4250830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 303727 |
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| End bp | 304902 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638116839 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_732421 |
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| Protein GI | 113968628 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.879349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000722624 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGATCCTC AAGCCCTTTT ACTGATCAAG TTTATCTGCC TGCTAACAGG TACTGCGGCT
ATTGCATGGG GCTTGATCGC TCAACCATTA AAAATCGCCA CCTTAGCCAG TATGCGGTTT
TCCCTCGCAA ACCTCTTTGT ATTCCTTGGC ATAATACTCA ACACTCAGCG AACAGAATCA
AATAGTTACC TCTATTGGTT TTGCTCGGAT ATATTAATCT TGCTGGGATT TATTATGTTA
CGTTGGGGTA CCCAGTACCT TTTTCGTTTA GAGCGCAGCA CCAAGTTCGA TCTGACCATC
CTCTGCATCA CCGCCGCATT AATGCTGACG GTTCCCCCGA TATCCCACTC AGAGCCAATG
CTTGCCATGC TGTTTTCTGC CAATGCCGCC CTCTCCTTTG TGATGCTCAC ACGGGATAAC
TACTCTGCAA TCAGTCGAGA TGTTAGTAAC AAAGTCGCGA CGGCTATGGT CTTGCCATTA
GTCGCCATGG TCATCATCTT CACTTTCCGT TTCTTCATCG CACTGTTTTC GTCAAACGAA
GACCATACCT TTATCGCCAT CTATCGAGAG GAGGCGACAC CAATGCTTTG GTTTTATGTC
GTCTTCACCC TTGTTATCAA TATTGTGATG ATAGGTAATG CCATGACTCG CCTTGTTAGC
AAAATCAAAA TATTAGCGGA GCGAGACCAA CTCACTGGCC TGTGGAATCG GCACGCAATG
CAGAAGCGGC TTGCGACTAT CCATCAACTT TGGCAAAAAA ATAATGAACC CTATAGTGTG
ATACTGCTCG ATATCGATCA CTTCAAACAA ATCAACGATC AATACGGCCA CGCCATAGGC
GATCTTGCCT TACTCACCGC GGCGAGACTG TTTAGCACTG TGCTGCGGGA ACATGACGTA
TTATGCCGCC ATGGAGGGGA AGAGTTTTTA GTCTTACTGC CAGCCACCAA CGCACGCGCC
GCCAGAACCG TCGCAGATAA GTTACATAGG GTGTTGAGGG AAAATCCACT GCAATGCCAA
GGGCAGGAGA TCCAGCTCTA TGCCAGTATT GGTTACGCCA CCATTTACCG AGGCTGTGAG
CCAGACAAGC TCTTAATCGA AGCCGACCAT GCCATGTATC AAGCTAAATC AGAGGGGCGA
GACAGGATCT GCCAAGCCCT AACACCACAA GCCTAA
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| Protein sequence | MDPQALLLIK FICLLTGTAA IAWGLIAQPL KIATLASMRF SLANLFVFLG IILNTQRTES
NSYLYWFCSD ILILLGFIML RWGTQYLFRL ERSTKFDLTI LCITAALMLT VPPISHSEPM
LAMLFSANAA LSFVMLTRDN YSAISRDVSN KVATAMVLPL VAMVIIFTFR FFIALFSSNE
DHTFIAIYRE EATPMLWFYV VFTLVINIVM IGNAMTRLVS KIKILAERDQ LTGLWNRHAM
QKRLATIHQL WQKNNEPYSV ILLDIDHFKQ INDQYGHAIG DLALLTAARL FSTVLREHDV
LCRHGGEEFL VLLPATNARA ARTVADKLHR VLRENPLQCQ GQEIQLYASI GYATIYRGCE
PDKLLIEADH AMYQAKSEGR DRICQALTPQ A
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