Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0281 |
Symbol | |
ID | 4251177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 301028 |
End bp | 301705 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638116836 |
Product | two component transcriptional regulator |
Protein accession | YP_732418 |
Protein GI | 113968625 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000001543 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAATAC TTTTAGTTGA AGATGATGCG ACAACGATCG ATTACATCGT TAAAGGATTT CTTGAGCAGG GGCATAATAT TGAGACCGCC AGCGATGGTC ATCAAGGCCT GCTGCAAGCC ACGAGTGGTC AGTACGACCT CTTGATTCTC GACCGCATGT TGCCCCAACT CGATGGTTTG AAACTGCTAG CCGCCCTCAG AGCCACGGGC AATCAAACCC CAGTGCTTAT CCTGTCGGCG CTGGCCCATG TGGATGAAAG GGTGAAAGGC CTGCGTGCGG GCGGCGATGA TTATATGACT AAGCCCTTTG CCTTTTCGGA GCTGCTCGTA CGTGCCGAAA AGTTGATGCA ACGGGGTCAA TCCGTCCCTA TTACCACAGA TTTAGTGGTC GGCGGCTTAA AAATGGAGCT GCTCACCCGC AATGTGACCT TAGATGGTCA CGATTTAATG CTGCAACCCA AAGAATTCCA ACTGCTTAAG TATCTGATGG AACACGCCAA TCAGGTTATT AGCCGCACGC TACTATTCGA AGCTGTGTGG GATTATCACT TCGATCCCCG TACTAATGTG ATCGACGTGC ATATCGCCAA GTTACGCCGC AAGTTTGAAG AGTTAGGCCA CGGTGAATTG ATTGAAACCG TAAGGGGAGC GGGTTATCGC TTACGCCAAA GGCATTAA
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Protein sequence | MKILLVEDDA TTIDYIVKGF LEQGHNIETA SDGHQGLLQA TSGQYDLLIL DRMLPQLDGL KLLAALRATG NQTPVLILSA LAHVDERVKG LRAGGDDYMT KPFAFSELLV RAEKLMQRGQ SVPITTDLVV GGLKMELLTR NVTLDGHDLM LQPKEFQLLK YLMEHANQVI SRTLLFEAVW DYHFDPRTNV IDVHIAKLRR KFEELGHGEL IETVRGAGYR LRQRH
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