Gene Shewmr4_0281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0281 
Symbol 
ID4251177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp301028 
End bp301705 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content50% 
IMG OID638116836 
Producttwo component transcriptional regulator 
Protein accessionYP_732418 
Protein GI113968625 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000001543 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAATAC TTTTAGTTGA AGATGATGCG ACAACGATCG ATTACATCGT TAAAGGATTT 
CTTGAGCAGG GGCATAATAT TGAGACCGCC AGCGATGGTC ATCAAGGCCT GCTGCAAGCC
ACGAGTGGTC AGTACGACCT CTTGATTCTC GACCGCATGT TGCCCCAACT CGATGGTTTG
AAACTGCTAG CCGCCCTCAG AGCCACGGGC AATCAAACCC CAGTGCTTAT CCTGTCGGCG
CTGGCCCATG TGGATGAAAG GGTGAAAGGC CTGCGTGCGG GCGGCGATGA TTATATGACT
AAGCCCTTTG CCTTTTCGGA GCTGCTCGTA CGTGCCGAAA AGTTGATGCA ACGGGGTCAA
TCCGTCCCTA TTACCACAGA TTTAGTGGTC GGCGGCTTAA AAATGGAGCT GCTCACCCGC
AATGTGACCT TAGATGGTCA CGATTTAATG CTGCAACCCA AAGAATTCCA ACTGCTTAAG
TATCTGATGG AACACGCCAA TCAGGTTATT AGCCGCACGC TACTATTCGA AGCTGTGTGG
GATTATCACT TCGATCCCCG TACTAATGTG ATCGACGTGC ATATCGCCAA GTTACGCCGC
AAGTTTGAAG AGTTAGGCCA CGGTGAATTG ATTGAAACCG TAAGGGGAGC GGGTTATCGC
TTACGCCAAA GGCATTAA
 
Protein sequence
MKILLVEDDA TTIDYIVKGF LEQGHNIETA SDGHQGLLQA TSGQYDLLIL DRMLPQLDGL 
KLLAALRATG NQTPVLILSA LAHVDERVKG LRAGGDDYMT KPFAFSELLV RAEKLMQRGQ
SVPITTDLVV GGLKMELLTR NVTLDGHDLM LQPKEFQLLK YLMEHANQVI SRTLLFEAVW
DYHFDPRTNV IDVHIAKLRR KFEELGHGEL IETVRGAGYR LRQRH