| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0278 |
|---|
| Symbol | |
|---|
| ID | 4251174 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 298120 |
|---|
| End bp | 298800 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 638116833 |
|---|
| Product | molybdate ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_732415 |
|---|
| Protein GI | 113968622 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4149] ABC-type molybdate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR02141] molybdate ABC transporter, permease protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.000000123104 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGATTGGC AGGCACTCTG GTTATCGGTC AAGCTCAGTA GCATCACGGT ATTGGTGCTG
ATCCCGCTGG CGATTCTGGC GGGCCGAGCC TTAGCCTACC GTCAGTTTGT GGGTAAGTCC
TGGGTTGAAG CCTTAATCAT GGTGCCCTTA GTCTTACCGC CGACTGTGAT CGGGTATTAC
TTGCTGGTGG GGCTAGGGAG TCAAAGCTGG TTAGGGCAAT GGTTAGAGCG TCTAACTGGG
CAGCAGTTAG TGTTTCATTT CTCGGGGTTA GTGCTGGCGT CCGTGCTGGT GAATATTCCC
TTTGCGCTGC AACCGATACA ACGCGCCTTT GAAGCTGTTC CTCATGATGT GCGCGATGCT
GCAGCCTGTT GCGGCATGAG CAAACTTAAG ATTCTGCTGA AAATTGAATT GCCTATGGTG
TGGCCTGGGG TGCTGACCGC CTTAGTGCTG TGCTTCTCCC ATGTACTCGG TGAGTTTGGG
GTCGTGTTGA TGATGGGCGG GAATATTGCC GGCGAGACCA AGACTATCTC GATTTCCATC
TACGACAGTG TTCAGGCCTT TGATTTTGGT GCTGCAGGAA CTATGTCTCT GGTATTGCTG
TTATTCGCGA TTACCGCATT GGCGCTCACC ACCAGTTTAT CGCGGCGTTT AGGAGGTCAG
CGTGGCGCAA ATCATCGCTG A
|
|---|
| Protein sequence | MDWQALWLSV KLSSITVLVL IPLAILAGRA LAYRQFVGKS WVEALIMVPL VLPPTVIGYY
LLVGLGSQSW LGQWLERLTG QQLVFHFSGL VLASVLVNIP FALQPIQRAF EAVPHDVRDA
AACCGMSKLK ILLKIELPMV WPGVLTALVL CFSHVLGEFG VVLMMGGNIA GETKTISISI
YDSVQAFDFG AAGTMSLVLL LFAITALALT TSLSRRLGGQ RGANHR
|
|---|
| |