Gene Shewmr4_0272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0272 
Symbol 
ID4251168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp292930 
End bp294579 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content52% 
IMG OID638116827 
Productelectron-transferring-flavoprotein dehydrogenase 
Protein accessionYP_732409 
Protein GI113968616 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000698819 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAACGCG AATCAATGGA ATTCGATGTT GTTATCGTCG GCGCAGGCCC AGCTGGCTTG 
GCCACTGCGT GTCGGTTGAT GCAGATATCA CAGAGTTCAG GCAAAGAAAT GACCGTCTGC
GTGGTAGAAA AAGGCTCCGA AGTGGGCGCG CACATTCTAT CTGGCGCCGT ATTCGAACCA
CGAGTGTTAG ATGAGCTATT CAGCGACTGG CGCGATTCAG GCGCTCCCGT CACCACAGCC
GTGACCCACG ATGAAATCTA TCTACTCAAC TCCGCCACCG ACAGCAAACT GATGCCCAAT
GCGTTTGTGC CTAAAACCAT GCACAACGAA GGCAACTATA TTGTCAGCGT AGGTAACCTC
TGCCGTTGGC TCGCGACCCG CGCCGAAGCG CTCGGCGTAG AAATCTTCCC AGGCTTTGCC
GCCAGCGAAT TACTCTTCAA TGAAGATAAC AGCGTGAAGG GCATCCTGAT TGGCGACATG
GGTATAGGTG CCGACGGCCA ACCGAAGGAC AGCTTTATGC CCGGCATGGA GCTACATGCC
AAATATACTG TGTTCTCAGA AGGTTGTCGT GGTCACTTAG GCAAACAGCT GATCGCGAAA
TACCACTTAG ATAATGGCAA GACTCCACAG CATTACGGCC TGGGCTTTAA AGAAATCTGG
AAAGTCCCCG CCGAACAACA CGAGCAAGGT AAAGTGGTGC ACACAGGTGG TTGGCCATTA
ACCGATGGCG CATCGGGTGG CGGCTTCCTC TACCATATGG AAGACAACCA AATTGCCGTG
GGGCTGATTA TCGACCTCAA CTACAAGAAT CCCCATTTAA GCCCGTTCGA TGAGTTCCAG
CGTTATAAGA CTCACCCAGT TATCGCCAAA TACTTAACCG GCGGTGAACG TTTGAGCTAT
GGTGCTCGCG CAATCACTAA GGGCGGCCTG AACTCACTGC CGAAGATGAG TTTCCCCGGC
GGTCTGCTGA TTGGTTGCGA TGCGGGTACC TTAAACTTTG CCAAGATCAA AGGCACCCAC
ACCGCCATGA AGAGCGGTAT TGTCGCGGCT GAAACCTTAG CCAAGGCGAT GCTGGCCGAG
GTTGAAGGCG GTAAAGATCT GGATTGTTTC CAAACCCATC TGGAAGAAAG CTGGTTACAC
GAAGAGTTAT ATAAGTCGCG CAACTTTGGC CCAGCAATGC ACAAGTTTGG CACTTTCCTC
GGCGGTGCAT TTAACTACAT AGATCAAAAC TGGTTCGGCG GTAAGTTCCC TATCACCCTG
CGTGATGAGC ACCCAGACTA TGCACAAATG GCCCCAGTAA GCGCCTACAG CAAGATTGAT
TATCCCAAGC CCGATGGCAA ACTCAGCTTC GATAAGCTCT CTTCAGTCTA TCTGTCGAGC
ACTTATCATG AGGAAGACCA ACCTTGCCAT CTGCGCTTAA AAGACAACAG CATCCCGCTC
GGAATAAACC TGACGCAATT TAACGAGCCA GCCCAGCGTT ACTGCCCTGC TGGCGTGTAC
GAAATCGTTG AAGAAGCCGG CCAGCCTAAG TTTGTTATCA ATGCGCAAAA CTGCATCCAC
TGCAAAACCT GCGACATTAA AGACCCTAGC CAAAACATTA CTTGGGTGAC GCCTGAGGGT
GGCGGTGGTC CAAACTACCC CAATATGTAA
 
Protein sequence
MERESMEFDV VIVGAGPAGL ATACRLMQIS QSSGKEMTVC VVEKGSEVGA HILSGAVFEP 
RVLDELFSDW RDSGAPVTTA VTHDEIYLLN SATDSKLMPN AFVPKTMHNE GNYIVSVGNL
CRWLATRAEA LGVEIFPGFA ASELLFNEDN SVKGILIGDM GIGADGQPKD SFMPGMELHA
KYTVFSEGCR GHLGKQLIAK YHLDNGKTPQ HYGLGFKEIW KVPAEQHEQG KVVHTGGWPL
TDGASGGGFL YHMEDNQIAV GLIIDLNYKN PHLSPFDEFQ RYKTHPVIAK YLTGGERLSY
GARAITKGGL NSLPKMSFPG GLLIGCDAGT LNFAKIKGTH TAMKSGIVAA ETLAKAMLAE
VEGGKDLDCF QTHLEESWLH EELYKSRNFG PAMHKFGTFL GGAFNYIDQN WFGGKFPITL
RDEHPDYAQM APVSAYSKID YPKPDGKLSF DKLSSVYLSS TYHEEDQPCH LRLKDNSIPL
GINLTQFNEP AQRYCPAGVY EIVEEAGQPK FVINAQNCIH CKTCDIKDPS QNITWVTPEG
GGGPNYPNM