Gene Shewmr4_0270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0270 
Symbol 
ID4251166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp290272 
End bp290628 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content43% 
IMG OID638116825 
Producthypothetical protein 
Protein accessionYP_732407 
Protein GI113968614 
COG category[S] Function unknown 
COG ID[COG3296] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.280793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000338917 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTGAGT CAGTGACTAA GAGTGAAAGA GATTTTGGCT TACTTGTGTA TGCCTCCAGT 
TTAATCGGTT ATTTAGTGCC ATTAGGCTCA ATTCTCGGAC CACTGATTAT GTGGTTGATG
AAACGTGAAG AGTCGGCTTT TGTCGACCAA TGCGGCCGTA GTTGCTTGAA CTTTAAATTA
AGCCTGTTGA TCTATGTGAT TATCAGCGGG CTGTTAGCCT TTGTGGGCAT TGGGTTTATC
TTCTTGATCA TCCTCGGTAT TCTCGACTTA GTTTGCACTA TCCTTGGGAT CATTAAGGCG
AGCGAAGGGC AAGTGTATCG TTATCCGCTG ACGATTAAGT TCCTTTCCGA TAACTAA
 
Protein sequence
MIESVTKSER DFGLLVYASS LIGYLVPLGS ILGPLIMWLM KREESAFVDQ CGRSCLNFKL 
SLLIYVIISG LLAFVGIGFI FLIILGILDL VCTILGIIKA SEGQVYRYPL TIKFLSDN