Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0269 |
Symbol | |
ID | 4251165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 289540 |
End bp | 290235 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638116824 |
Product | MOSC domain-containing protein |
Protein accession | YP_732406 |
Protein GI | 113968613 |
COG category | [S] Function unknown |
COG ID | [COG2258] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.480151 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000407513 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCGACCT TGTTGGTAAA TAGATTATCG GGTTTGTATT TAGGGGCGGT TCTACGAGAG ATTGACGGTG TTTCTACTGG TATCGACGGT AAAAAATCGG CGCAGCAGTT GCGAGTGTAT GTCGATCATG TCGAAGGCGA TGCGCAAGCC GATCCTAAGC ACCATGGCGG ACTCGACCGA GTGCTGCATC ATTTCCCTCG CGAGCATTAT GGTCAGTACC GCCGCTGGGA TTTAATCACC CAACTCGAAG ATGCGCCGAG CATGGGTGAA AACATCAGCA CTGTTGGTTT GAATGAAACC GAGGTCAATA TCGGCGATAT CCTGCAAATC GGCGCTGTGA CAGTGCAGGT GACTCAGCCG CGCTCACCTT GCTTTAAATT GAACCTGCAA TTTGGCCATA GAGACTTTGC CCTTGCCATG CAGCAGAGTC AGCTATGCGG TTGGTTTTAC AGAGTATTAA CCCCAGGTGT GATTCAGCTA AACGACAGGA TAGAATTAGT CGAGCGTAAA ACCGATATCA GTGTCGCCGA GGCCATGGCG TTGTACTTCT CACCCGAATA CGATGCCAAA GCCTATGATA GACTCGCCTC CTGTGAAGGG TTGGCACAAA GCTGGGTGAA TAGCCTGCAG CGGCGCTTAG CGACACAGCA AGTCGAAGAT TGGCAGATGC GCTTGTATGG GCCAAAAGGT AAATAA
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Protein sequence | MSTLLVNRLS GLYLGAVLRE IDGVSTGIDG KKSAQQLRVY VDHVEGDAQA DPKHHGGLDR VLHHFPREHY GQYRRWDLIT QLEDAPSMGE NISTVGLNET EVNIGDILQI GAVTVQVTQP RSPCFKLNLQ FGHRDFALAM QQSQLCGWFY RVLTPGVIQL NDRIELVERK TDISVAEAMA LYFSPEYDAK AYDRLASCEG LAQSWVNSLQ RRLATQQVED WQMRLYGPKG K
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