Gene Shewmr4_0244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0244 
Symbol 
ID4251018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp262731 
End bp263327 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content52% 
IMG OID638116800 
Productcytochrome B561 
Protein accessionYP_732382 
Protein GI113968589 
COG category[C] Energy production and conversion 
COG ID[COG3658] Cytochrome b 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000989788 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCTCAA ATATGCAGCA AAACATCAAA GTCTGGGATC CCTTGATCCG TATCTTTCAC 
TGGTCATTGG TGGGCTTTTT TACCTTAGCC TACCTCACCG AAGGTGAAGA CGAATGGATG
AACATCCACA GTTACGCTGG CTACAGCATC TTAACCCTGC TGGTATTTCG CCTGTTATGG
GGCGTGATTG GCACTCACCA TGCGCGTTTT ATCAACTTTG TTACCCGTCC GAGCATCGCA
TGGACTTACC TGAAGGAACT CTTCACGGGC AAGGCTAAGG ATTACATCGG CCACAATCCG
GCAGGCGCGC TGATGATAGT CGCCCTGATC CTCTGCATAG GGTTCACGGG CTTCTCCGGC
ATGGCGCTTT ATGCCACCGA TGGCCAAGGT CCACTAGCCA CAAGCTTTTT CGCCTCTTGG
CCCGAGGGCG CACTGAAAGA AGTGCATGAG TTTTTCGCCA ACTTCAGCCT GTTTCTTATC
GTCACCCATG TCGGCGGCGT GATCGTCAGC AGCCTGCTGC ATAAGGAAAA CCTCGTCAAA
GCCATGCTGA CAGGTAAAAA GCAGCGCCCG CTGATCCAAC AAGATGAACA TCAATAA
 
Protein sequence
MSSNMQQNIK VWDPLIRIFH WSLVGFFTLA YLTEGEDEWM NIHSYAGYSI LTLLVFRLLW 
GVIGTHHARF INFVTRPSIA WTYLKELFTG KAKDYIGHNP AGALMIVALI LCIGFTGFSG
MALYATDGQG PLATSFFASW PEGALKEVHE FFANFSLFLI VTHVGGVIVS SLLHKENLVK
AMLTGKKQRP LIQQDEHQ