Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0244 |
Symbol | |
ID | 4251018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 262731 |
End bp | 263327 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638116800 |
Product | cytochrome B561 |
Protein accession | YP_732382 |
Protein GI | 113968589 |
COG category | [C] Energy production and conversion |
COG ID | [COG3658] Cytochrome b |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0000989788 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCTCAA ATATGCAGCA AAACATCAAA GTCTGGGATC CCTTGATCCG TATCTTTCAC TGGTCATTGG TGGGCTTTTT TACCTTAGCC TACCTCACCG AAGGTGAAGA CGAATGGATG AACATCCACA GTTACGCTGG CTACAGCATC TTAACCCTGC TGGTATTTCG CCTGTTATGG GGCGTGATTG GCACTCACCA TGCGCGTTTT ATCAACTTTG TTACCCGTCC GAGCATCGCA TGGACTTACC TGAAGGAACT CTTCACGGGC AAGGCTAAGG ATTACATCGG CCACAATCCG GCAGGCGCGC TGATGATAGT CGCCCTGATC CTCTGCATAG GGTTCACGGG CTTCTCCGGC ATGGCGCTTT ATGCCACCGA TGGCCAAGGT CCACTAGCCA CAAGCTTTTT CGCCTCTTGG CCCGAGGGCG CACTGAAAGA AGTGCATGAG TTTTTCGCCA ACTTCAGCCT GTTTCTTATC GTCACCCATG TCGGCGGCGT GATCGTCAGC AGCCTGCTGC ATAAGGAAAA CCTCGTCAAA GCCATGCTGA CAGGTAAAAA GCAGCGCCCG CTGATCCAAC AAGATGAACA TCAATAA
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Protein sequence | MSSNMQQNIK VWDPLIRIFH WSLVGFFTLA YLTEGEDEWM NIHSYAGYSI LTLLVFRLLW GVIGTHHARF INFVTRPSIA WTYLKELFTG KAKDYIGHNP AGALMIVALI LCIGFTGFSG MALYATDGQG PLATSFFASW PEGALKEVHE FFANFSLFLI VTHVGGVIVS SLLHKENLVK AMLTGKKQRP LIQQDEHQ
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